Dyella sp. GSA-30: DYGSA30_34450
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Entry
DYGSA30_34450 CDS
T10269
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein B
KO
K19804
lipopolysaccharide assembly protein B
Organism
dyg Dyella sp. GSA-30
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
DYGSA30_34450 (lapB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_12
TPR_7
TPR_1
TPR_11
ARM_TT21_C
TPR_19
TPR_8
NatA_aux_su
ARM_TT21_N
TPR_CcmH_CycH
ARM_TT21
Phage_tail_U
DUF7129
NRDD
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
BDU21988
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Position
complement(4125383..4126555)
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AA seq
390 aa
AA seq
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MTGLYVLALLVPLAFASGWWSARRSGARRSGAQVSELSSDYFRGLNYLLNEEQDKAIEVF
LRLAEYNRDTVETHLALGNLFRRRGEVDRAIRLHQHLVSRPGLSDAMKTVALLELGEDYM
RAGLLDRAETLFSDLVAMDAHAPSALRHLIAIYQHERDWHKAIEHARRLEAMIGEDESGM
IAQFYCELADQSRQHGARQEAREYLQQAFASQPSSVRAFMLTGRLFADEGEHAQAVKVYE
EAIEADIAFVPEILPPLLNSYARSQQMERAEHFLRDMLGRYHGISPVLALTKLYQQRDGE
RTAIDFLTSQLRQRPSVRGLMALIDATMDKIDGEARENFLILRDLTKKLLEGQAMYRCSR
CGFGAKAHHWQCPSCKSWSTIRPIHGVANE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacggggctttatgtgcttgctctgctggttcccttggcctttgccagtgggtggtgg
agtgcccgtcgatcgggcgcccggcgctcgggggcacaggtcagcgagctgtcgtccgat
tacttccgcggcctgaactacctgctcaacgaggagcaggacaaggcgatcgaagttttc
ctgcgcttggccgaatacaaccgcgacacggtcgaaacccatctcgcgctgggtaatctg
ttccgccgccggggcgaggtcgatcgcgccattcgactgcatcaacatctggtatcgcgt
cccggcctgtccgatgcgatgaagaccgtcgcgctgctggagctgggcgaagactatatg
cgtgccggtctgctcgatcgcgccgaaacgctgttctccgatctggtggccatggatgca
catgcaccatcggccttgcgtcatctgattgcgatctatcaacacgagcgcgattggcat
aaagccatcgaacatgcgcgccggctcgaggcaatgatcggcgaagacgagtcgggcatg
atcgcgcagttctactgcgagttggccgaccagtcacgccagcacggtgcacgtcaggaa
gcacgcgagtatctgcagcaggcattcgccagccagcccagtagcgtgcgcgctttcatg
ctgacggggcgcctgttcgccgacgaaggcgagcacgcgcaagcggtcaaggtgtacgaa
gaagcgatcgaagcggatatcgcttttgtgccggaaatcctgccgcctttgctcaatagc
tatgcacgttcgcagcagatggaacgcgccgagcatttcctgcgcgacatgcttggccgt
tatcacggtatctcgccggtgctggcattgaccaagctttatcagcagcgcgatggtgaa
cgcacggcgattgatttcctgacctcgcagttgcgtcagcgtccgtcggtacgtgggctg
atggccttgatcgatgcgaccatggacaagatcgacggtgaggcgagggagaatttcctg
atcctgcgcgacctcaccaaaaagttgctcgaaggccaggcgatgtatcgctgcagccgt
tgtggcttcggtgccaaggcacatcattggcagtgtccgagctgcaagagctggagcacg
attcgcccgatccatggcgtagccaacgagtga
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