Dyella sp. GSA-30: DYGSA30_38060
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Entry
DYGSA30_38060 CDS
T10269
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dyg Dyella sp. GSA-30
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dyg03016
]
DYGSA30_38060 (truD)
Enzymes [BR:
dyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DYGSA30_38060 (truD)
Transfer RNA biogenesis [BR:
dyg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DYGSA30_38060 (truD)
Prokaryotic type
DYGSA30_38060 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BDU22349
LinkDB
All DBs
Position
complement(4507765..4508790)
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AA seq
341 aa
AA seq
DB search
MSELPTAYGQPPLSARLRVAPEDFVVEEILGYDADGEGEHALLWVEKRGANTDWVARELA
RYAGVPPLNVGYAGLKDRHAVTRQTFSVGLAGKPEPDWTAFPSTEAKVLAATRHRRKLKR
GALRGNRFVLVLRDVEGDRAAAEQVLAQIAQRGVPNYFGEQRFGREGGNVAQARAMFAGR
RVDRDKRAFLLSAARSEIFNHLLAARIERAAWDSPLDGEIWSLAGSRSWFGPEPFDEVLA
GRLAKGDIHPSGPLWGDGETPAQGDAGALEREIAAANEDLAKGLAGARMEQERRPLRLMP
QGLRWRWLEGDALELSFELPAGAYATVVVRELAQSKQDSPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcttcccaccgcctatggccaaccgcctctctccgcacgactgcgcgtcgct
ccggaggacttcgtcgtcgaggagattctcggctatgacgcagacggcgagggcgagcac
gcattgctgtgggtggagaagcgtggcgcgaacaccgactgggtggcgcgcgagctggcc
cgttacgcgggcgtgccgccgctcaatgtcggttatgccggcctgaaggatcgccacgct
gtgacgcggcagacgttttcggtcgggcttgccggtaagccggagccggactggacggca
tttccctcgaccgaagccaaggtgctcgcggccaccaggcatcgacgcaagttgaagcgc
ggcgcgctgcgcgggaatcgtttcgtgctcgtgttgcgcgacgtcgaaggcgatcgcgcc
gcggccgagcaggtgcttgcgcagatcgcgcagcgtggcgtgcccaattatttcggcgag
cagcgcttcggccgtgaaggcggcaacgtggcgcaggcgcgggcgatgtttgccggtcgc
cgtgtcgatcgcgacaagcgtgcatttctgctttcggccgcgcgctcggagatcttcaac
catctgctcgcggcacggatcgagcgagcggcatgggacagcccgctcgacggtgagatc
tggtcgctggccggttcgcgttcttggttcggccccgagccgttcgacgaagtgctggcc
gggcgcctggccaagggcgacattcatccgtcgggtccgctgtggggcgatggtgagacg
ccggcgcagggtgatgccggtgcgcttgagcgtgagatcgccgcagcgaacgaagaccta
gccaagggactggccggtgcgcggatggagcaagagcggcggccattgcgcctgatgccg
cagggattgcgctggcgttggctggaaggcgatgcgttggagttgtcgtttgaattgcct
gcaggtgcttatgcgacggtggtggtgcgtgaacttgcgcagagcaagcaggacagcccg
gcctga
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