Dyella sp. GSA-30: DYGSA30_45490
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Entry
DYGSA30_45490 CDS
T10269
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DYGSA30_45490 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dyg03400
]
DYGSA30_45490 (ruvB)
Enzymes [BR:
dyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DYGSA30_45490 (ruvB)
DNA repair and recombination proteins [BR:
dyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DYGSA30_45490 (ruvB)
RecFOR pathway proteins
DYGSA30_45490 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_16
Mg_chelatase
AAA_22
TIP49
AAA_18
Rad17
nSTAND3
NTPase_1
AAA_14
AAA_17
Bac_DnaA
AAA_33
TsaE
RNA_helicase
NB-ARC
AAA_28
AAA_lid_3
ABC_tran
AAA_24
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDU23092
LinkDB
All DBs
Position
complement(5292521..5293570)
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AA seq
349 aa
AA seq
DB search
MTDHPRIVTNAAQMDDEALEASIRPKRLAEYLGQQAVREQLSIYIEAAKKRGGALDHVLI
FGPPGLGKTTLSHVIANELGVNVRSTSGPVLERAGDLAALLTNLEAHDVLFVDEIHRLSP
VVEEVLYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGLLTAPLRDRFGIVQR
LEFYTPAELTAIVRRSARIMGIACEIDGAEEIARRSRGTPRIANRLLRRVRDYAEVRANG
QITREVANAAMSMLKVDAEGFDDLDRRLLATIIENFDGGPVGVESLAAALSEDRGTLEDV
VEPYLIQQGFLVRSARGRMASAKAWRHLGLTPPPRQTPVADLFSGEGEG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcacccccgcattgtcaccaacgccgcgcagatggacgacgaggccctcgag
gccagtattcgtcccaagcggctggccgagtatctgggccagcaggcggtgcgcgagcag
ctgtcgatctatatcgaggcggcgaaaaagcgcggcggtgcactcgaccatgtgctgatc
ttcgggccgcccggcctgggcaagaccaccttgagccacgtgatcgccaacgagctgggc
gtcaatgtccgttccacctccgggccggtactggagcgggcgggggacctggctgcgctg
ctgaccaacctcgaagcgcacgacgtgttgttcgtcgacgagatccatcgcctgtcgccg
gtggtcgaagaggtgctctatcctgcgatggaagacttccagatcgacatcatgatcggc
gaaggcccggccgcgcgctcgatcaagctcgacctgccaccgtttacgttgatcggcgcc
accacccgcgccggtctgctgacggcgccgctgcgtgaccgcttcggcatcgtgcagcgt
ttggagttctatacgcccgcggagctcaccgccatcgtgcgtcgctcggcacgcatcatg
ggcatcgcctgcgagatcgatggtgcggaagaaatcgcgcggcgctcgcgtggcacgccg
cgtatcgccaaccggctgctgcgccgcgtgcgcgactacgccgaagtgcgcgccaacggt
cagatcacgcgcgaagtggccaatgctgccatgagcatgctcaaggtcgatgccgaaggt
ttcgacgatctggaccggcgcctgcttgccaccattatcgagaacttcgatggcggtccg
gtcggggtggaatccctggccgcggcgctcagcgaagatcgcggcacgctcgaagacgtg
gtcgaaccctatctgatccagcaggggttcctggtccggagcgcccgtggccgcatggcc
agcgccaaggcctggcggcacctgggtctgacgccgccgccgcgccagaccccggtggcg
gacctgttttccggcgagggagaagggtaa
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integrated database retrieval system