KEGG   Dyella sp. GSA-30: DYGSA30_45490
Entry
DYGSA30_45490     CDS       T10269                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dyg  Dyella sp. GSA-30
Pathway
dyg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DYGSA30_45490 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dyg03400]
    DYGSA30_45490 (ruvB)
Enzymes [BR:dyg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DYGSA30_45490 (ruvB)
DNA repair and recombination proteins [BR:dyg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DYGSA30_45490 (ruvB)
    RecFOR pathway proteins
     DYGSA30_45490 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 AAA_16 Mg_chelatase AAA_22 TIP49 AAA_18 Rad17 nSTAND3 NTPase_1 AAA_14 AAA_17 Bac_DnaA AAA_33 TsaE RNA_helicase NB-ARC AAA_28 AAA_lid_3 ABC_tran AAA_24 NPHP3_N
Other DBs
NCBI-ProteinID: BDU23092
LinkDB
Position
complement(5292521..5293570)
AA seq 349 aa
MTDHPRIVTNAAQMDDEALEASIRPKRLAEYLGQQAVREQLSIYIEAAKKRGGALDHVLI
FGPPGLGKTTLSHVIANELGVNVRSTSGPVLERAGDLAALLTNLEAHDVLFVDEIHRLSP
VVEEVLYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGLLTAPLRDRFGIVQR
LEFYTPAELTAIVRRSARIMGIACEIDGAEEIARRSRGTPRIANRLLRRVRDYAEVRANG
QITREVANAAMSMLKVDAEGFDDLDRRLLATIIENFDGGPVGVESLAAALSEDRGTLEDV
VEPYLIQQGFLVRSARGRMASAKAWRHLGLTPPPRQTPVADLFSGEGEG
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaccgatcacccccgcattgtcaccaacgccgcgcagatggacgacgaggccctcgag
gccagtattcgtcccaagcggctggccgagtatctgggccagcaggcggtgcgcgagcag
ctgtcgatctatatcgaggcggcgaaaaagcgcggcggtgcactcgaccatgtgctgatc
ttcgggccgcccggcctgggcaagaccaccttgagccacgtgatcgccaacgagctgggc
gtcaatgtccgttccacctccgggccggtactggagcgggcgggggacctggctgcgctg
ctgaccaacctcgaagcgcacgacgtgttgttcgtcgacgagatccatcgcctgtcgccg
gtggtcgaagaggtgctctatcctgcgatggaagacttccagatcgacatcatgatcggc
gaaggcccggccgcgcgctcgatcaagctcgacctgccaccgtttacgttgatcggcgcc
accacccgcgccggtctgctgacggcgccgctgcgtgaccgcttcggcatcgtgcagcgt
ttggagttctatacgcccgcggagctcaccgccatcgtgcgtcgctcggcacgcatcatg
ggcatcgcctgcgagatcgatggtgcggaagaaatcgcgcggcgctcgcgtggcacgccg
cgtatcgccaaccggctgctgcgccgcgtgcgcgactacgccgaagtgcgcgccaacggt
cagatcacgcgcgaagtggccaatgctgccatgagcatgctcaaggtcgatgccgaaggt
ttcgacgatctggaccggcgcctgcttgccaccattatcgagaacttcgatggcggtccg
gtcggggtggaatccctggccgcggcgctcagcgaagatcgcggcacgctcgaagacgtg
gtcgaaccctatctgatccagcaggggttcctggtccggagcgcccgtggccgcatggcc
agcgccaaggcctggcggcacctgggtctgacgccgccgccgcgccagaccccggtggcg
gacctgttttccggcgagggagaagggtaa

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