Dyella sp. GSA-30: DYGSA30_45550
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Entry
DYGSA30_45550 CDS
T10269
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DYGSA30_45550 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dyg01007
]
DYGSA30_45550 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dyg03016
]
DYGSA30_45550 (aspS)
03029 Mitochondrial biogenesis [BR:
dyg03029
]
DYGSA30_45550 (aspS)
Enzymes [BR:
dyg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
DYGSA30_45550 (aspS)
Amino acid related enzymes [BR:
dyg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DYGSA30_45550 (aspS)
Transfer RNA biogenesis [BR:
dyg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DYGSA30_45550 (aspS)
Prokaryotic type
Other AARSs
DYGSA30_45550 (aspS)
Mitochondrial biogenesis [BR:
dyg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
DYGSA30_45550 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BDU23098
LinkDB
All DBs
Position
complement(5298273..5300093)
Genome browser
AA seq
606 aa
AA seq
DB search
MLPLPAFIRHFSALAGSFKRMRTHYCGLIDESLVGQTVTLCGWVNTLRLQSHVAFVDLRD
HEGIAQIVVERDNADAFAIAGEVGYEYCLRVTGTIRKRLSANDKLKTGTVELLAEKVEIL
NAAKDLPFALHETPNEDMRMTYRYLDMRRPEMQKMMRTRIKLVQALRRYLDARGFQDIET
PILTKATPEGARDYLVPSRVHPGQFYALPQSPQLFKQILMMAGFDRYYQIARCFRDEDLR
ADRQPEFTQLDLEFAFVEEKDVQDFVEALIRHVFKEVQGVELDAAFPRMTWAEAMRRFGS
DKPDLRIALELVDVADALKHVEFKVFAEPANDPAGRVAALRLPGGATLTRKEIDQLTEYV
AKYGAKGLAWLRVDDLSKGREGINSPVAKFLDDNALNALLKATDAQSGDMVFVGAGKWKT
VTDFMGALRLKVGKDRGLVDSSWKPLWVTDFPMFEYDEEEKRFVALHHPFTAPKVDDIGD
LRAHAATAVSRGYDMVLNGNEIGGGSIRIHRPEMQSAVFELLGIGAEEAEAKFGFLLKAL
KFGAPPHGGLAFGIDRIAALMAGTESIRDVIAFPKTTSAQDLMTDAPSAVSEPQLKELHV
RTVVTE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgctaccattgccggcctttattcgtcatttttcggcacttgccgggagcttcaagcgc
atgcgcacgcattactgcggcctcattgatgagtcgctggttggtcagaccgttaccctg
tgcggctgggtaaatacgcttcgcctgcagagccatgtggccttcgtcgatctgcgcgat
cacgagggcatcgcccagatcgtggtcgagcgcgataacgccgatgcgttcgcgatcgct
ggcgaggtcggttacgagtactgcctgcgcgtcaccggcaccatccgcaagcgcctgtcg
gccaacgacaagctcaagaccggcacggtcgagctgctggccgagaaggtcgagattctc
aatgccgcgaaggaccttccgttcgcgctgcacgagaccccgaacgaagacatgcggatg
acctaccgctacctcgatatgcgccgccccgagatgcagaagatgatgcgtacgcgcatc
aagctggtgcaggctctgcgtcgctatctggatgcgcgcgggtttcaggatatcgagacg
ccgatcctgaccaaggcgacgcccgaaggtgcgcgtgactatctcgtgcccagccgcgtc
catcccggccagttctatgcgttgccgcagtcgccgcagctgttcaagcagatcctgatg
atggccggtttcgatcgctactatcagatcgcccgctgcttccgcgacgaggacctgcgc
gccgaccgccagcctgaattcacccagctcgacctcgagtttgcgtttgtcgaagaaaaa
gacgtgcaggatttcgtcgaggccttgatccgccatgtgttcaaggaagtgcagggcgtc
gaactcgacgccgccttcccgcgcatgacctgggccgaggccatgcgccgtttcggttcg
gacaagccggatctgcgcatcgcgctggagctggtcgatgtcgccgatgcgctcaagcac
gtcgagttcaaggtttttgccgagccggcgaacgatccggccggtcgtgtcgctgcgctg
cgccttccgggcggggcgacgttgacgcgtaaggaaatcgaccagctcaccgaatacgtg
gccaagtacggcgccaagggcctggcctggctgcgcgtggacgacctgtccaaggggcgc
gaaggcatcaattcgccggtggcgaagttccttgacgacaacgcgctgaatgccttgctc
aaggcgaccgatgcgcagagcggcgacatggtgtttgtcggcgccggcaagtggaagacg
gttaccgatttcatgggcgcgctgcgtctgaaggtcggcaaggaccgtggcctggtcgat
agcagctggaaaccgctgtgggttaccgacttcccgatgttcgagtacgacgaggaagaa
aagcgtttcgtcgcgctgcatcacccctttaccgcgcccaaggtcgacgacatcggcgat
ctgcgcgcgcatgccgccaccgcggtgagccgcggttacgacatggtgctcaacggcaac
gagatcggcggtggctcgatccgtatccatcgtccggaaatgcagagtgcggtgttcgag
ctgctgggcatcggcgcggaagaggccgaggcgaagttcggcttcctgctcaaggccttg
aagttcggcgctccgccgcatggcggcctggcgttcggtatcgaccgcattgccgcgctg
atggcgggtaccgagtcgatccgcgacgtgatcgccttccccaagaccaccagtgcccag
gatctgatgaccgatgcgccgtcggcggtgtcggagccccaattgaaggagttgcacgtg
cggacggtggtcacagagtaa
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