Dyella sp. GSA-30: DYGSA30_45830
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Entry
DYGSA30_45830 CDS
T10269
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dyg Dyella sp. GSA-30
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dyg03009
]
DYGSA30_45830 (rluD)
Enzymes [BR:
dyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DYGSA30_45830 (rluD)
Ribosome biogenesis [BR:
dyg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DYGSA30_45830 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
TTC3_9th
S4
Motif
Other DBs
NCBI-ProteinID:
BDU23126
LinkDB
All DBs
Position
complement(5331251..5332150)
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AA seq
299 aa
AA seq
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MFPDYSRSRLTGWIKDGAVTLDGAKAPPRQLLRGGEKVLLEAVLVVEVSSQPEAIDLDIV
HEDDYLLVLNKPVGLVVHPGAGNPAGTVLNALLHHDPKLAELPRGGIVHRLDKDTSGLMV
VARTLAAHTGLVDMLSRHEVERQYEAIVVGTMVAGGTVDAAIGRHMGDRLRQAVRDEEDG
KHAVTHYRLRERFRAHSLIQCSLETGRTHQIRVHMAHIGHPLIGDPLYGGGLKLPKGATP
ELVAALRGFRRQALHAERLAFEHPVTHEPLSFSAERPADQQLLIDALRHDLAEHGHNDY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgactattcccgttcccgcctgaccggctggatcaaggacggtgcggtgacc
ctggacggtgccaaggcgccgccccgccagctccttcgcggaggcgaaaaagtgctgctg
gaggcggtattggtcgtcgaggtcagctcccagcccgaggccatcgacctggatatcgtc
catgaggacgattacctgctggtgctgaacaagccggtcggcctggtcgtgcacccgggg
gcgggcaaccctgccggtaccgtgctcaatgccttgctgcatcacgatcccaagctggcc
gaactgccgcgcgggggcatcgtgcaccgcctggacaaggacacctccggtctgatggtg
gtcgcgcgcaccctggcggcgcacaccggcctggtcgacatgctttcgcgccacgaggtg
gagcgtcagtacgaagccattgtcgtcggcaccatggtggcaggcggtacggtcgatgcc
gcgattggccgccacatgggcgaccgcctgcgtcaggccgtgcgcgacgaggaagacggc
aagcatgccgtcacccattaccggttgcgggagcgtttccgtgcccacagcctgatccag
tgcagcctggaaaccggccgtacccatcagatccgcgtgcatatggcgcatatcggccat
ccgctgatcggcgacccgctttacggcggtggcctcaagctgcccaagggggcgacaccc
gaactggtggcggccttgcgtggattccgtcgtcaggccctgcatgccgaacgactggcg
ttcgagcacccggtgacgcacgagccgctgtcgttcagtgccgagcggccggcggaccag
cagttattgatcgacgcgttgcgccacgatctggccgaacacgggcacaacgactactga
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