KEGG   Dysgonomonas sp. HDW5B: G7051_02290
Entry
G7051_02290       CDS       T09584                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dyh  Dysgonomonas sp. HDW5B
Pathway
dyh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dyh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G7051_02290 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dyh03019]
    G7051_02290 (rny)
Messenger RNA biogenesis [BR:dyh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G7051_02290 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd LapA_dom KH-I_KHDC4-BBP ArfB PspB
Other DBs
NCBI-ProteinID: QIK53237
LinkDB
Position
complement(562249..563778)
AA seq 509 aa
MEIVFTIIAFIGGVVVAWLVLNFVTNARLKRRIEESEREAEVIKKNKLLEVKEQALQMKA
EFEKQVNARTSKLQVAENKVKQREQTLNQKQEEIQRRKSEVEAIKDNLDSQLEIVDKKKQ
DLDKLHKQEVERLEALSGLSADEIKAKLVEALKDEAKSDAQSFITEIVEEAKMTANKEAK
KIVVQTIQRVATETAIENAITVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVDDTPE
AIVISGFDPVRREIARLALHQLVADGRIHPARIEEVVSKVKKQIEEEIIETGKRTAIDLG
IHGLHPEMIRMIGKMKYRSSYGQNLLQHARETANLCAIMAAELGLNVKKAKRAGLLHDIG
KVPDDEPELPHALLGMKLAEKYKEKPDICNAIGAHHDEIEMTTLLAPIVQVCDAISGARP
GARREIVEAYIKRLNDLEQLAMSYPGVLKTYAIQAGRELRVIVGADKVDDVETEKLSAEI
AKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggaaatagtatttacgataatcgccttcattggaggtgtagtagtagcttggctcgtt
cttaactttgtaacaaatgcgagactaaaaagacgtattgaagaatcggaacgtgaagct
gaggtaattaagaaaaataaattactcgaagtaaaagagcaagccttacaaatgaaggcg
gagtttgaaaaacaagtaaatgcccgtacttcgaaattgcaggttgccgaaaataaagta
aagcaacgagagcaaacactcaatcaaaagcaagaagaaatacaacgccgaaaaagcgaa
gtagaagctatcaaagacaaccttgatagtcagttggaaatagtcgataagaaaaagcaa
gatcttgataagcttcacaagcaagaagtggaaagacttgaagctctgtcgggattgtcg
gcagacgaaataaaagctaaattggtggaagccttaaaagatgaggcgaaatctgatgca
cagtcgtttattaccgagattgtagaagaggctaaaatgacggccaataaagaggctaag
aaaattgtagttcaaaccatacaaagagttgctacagaaacagcaattgaaaatgccatt
actgttttccatattgattcggacgaagttaaaggacgtatcatcggacgtgaaggacgt
aatattagagcacttgaggctgctacgggtgttgaaatcgtggtagatgatactcctgag
gcaattgtaatttcagggtttgatcctgtaagaagagaaatcgcacgtttagcactgcac
caattggtagcagacggacgtattcaccctgcaagaatcgaagaagttgtttctaaagtt
aagaaacaaattgaagaagagataattgaaacaggtaagcgaacagctatcgatttaggt
atacacggtttgcatcccgaaatgatccgtatgatcggtaaaatgaaatacagatcgtct
tatggtcaaaacttattgcagcatgctcgtgagacagccaatttatgtgcgataatggca
gctgaattgggtcttaacgtgaagaaagcaaaaagagcaggtctgttacatgatataggt
aaagtgccggatgatgagccggaattacctcacgcattgttaggtatgaagcttgccgaa
aaatataaagaaaaacctgatatttgtaatgcaataggtgctcaccacgatgagatcgaa
atgacaacattgctagcaccaattgttcaggtttgtgatgctatatcgggagcacgtccc
ggtgcacgtcgcgagatcgtagaggcttatatcaagcgtttgaatgatttggagcaattg
gcaatgtcttatccgggtgtgttaaaaacatatgcaatacaagccggtcgtgaacttcgt
gttattgttggagcagacaaagtggatgatgtggaaacagaaaaattgtcagctgaaata
gctaagaaaattcaagacgagatgacgtatcccggacaagtgaagattactgtaattcga
gaaactagagctgtaagtttcgctaaataa

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