Dysgonomonas sp. HDW5B: G7051_02290
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Entry
G7051_02290 CDS
T09584
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dyh
Dysgonomonas sp. HDW5B
Pathway
dyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7051_02290 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dyh03019
]
G7051_02290 (rny)
Messenger RNA biogenesis [BR:
dyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7051_02290 (rny)
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Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
LapA_dom
KH-I_KHDC4-BBP
ArfB
PspB
Motif
Other DBs
NCBI-ProteinID:
QIK53237
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Position
complement(562249..563778)
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AA seq
509 aa
AA seq
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MEIVFTIIAFIGGVVVAWLVLNFVTNARLKRRIEESEREAEVIKKNKLLEVKEQALQMKA
EFEKQVNARTSKLQVAENKVKQREQTLNQKQEEIQRRKSEVEAIKDNLDSQLEIVDKKKQ
DLDKLHKQEVERLEALSGLSADEIKAKLVEALKDEAKSDAQSFITEIVEEAKMTANKEAK
KIVVQTIQRVATETAIENAITVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVDDTPE
AIVISGFDPVRREIARLALHQLVADGRIHPARIEEVVSKVKKQIEEEIIETGKRTAIDLG
IHGLHPEMIRMIGKMKYRSSYGQNLLQHARETANLCAIMAAELGLNVKKAKRAGLLHDIG
KVPDDEPELPHALLGMKLAEKYKEKPDICNAIGAHHDEIEMTTLLAPIVQVCDAISGARP
GARREIVEAYIKRLNDLEQLAMSYPGVLKTYAIQAGRELRVIVGADKVDDVETEKLSAEI
AKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtatttacgataatcgccttcattggaggtgtagtagtagcttggctcgtt
cttaactttgtaacaaatgcgagactaaaaagacgtattgaagaatcggaacgtgaagct
gaggtaattaagaaaaataaattactcgaagtaaaagagcaagccttacaaatgaaggcg
gagtttgaaaaacaagtaaatgcccgtacttcgaaattgcaggttgccgaaaataaagta
aagcaacgagagcaaacactcaatcaaaagcaagaagaaatacaacgccgaaaaagcgaa
gtagaagctatcaaagacaaccttgatagtcagttggaaatagtcgataagaaaaagcaa
gatcttgataagcttcacaagcaagaagtggaaagacttgaagctctgtcgggattgtcg
gcagacgaaataaaagctaaattggtggaagccttaaaagatgaggcgaaatctgatgca
cagtcgtttattaccgagattgtagaagaggctaaaatgacggccaataaagaggctaag
aaaattgtagttcaaaccatacaaagagttgctacagaaacagcaattgaaaatgccatt
actgttttccatattgattcggacgaagttaaaggacgtatcatcggacgtgaaggacgt
aatattagagcacttgaggctgctacgggtgttgaaatcgtggtagatgatactcctgag
gcaattgtaatttcagggtttgatcctgtaagaagagaaatcgcacgtttagcactgcac
caattggtagcagacggacgtattcaccctgcaagaatcgaagaagttgtttctaaagtt
aagaaacaaattgaagaagagataattgaaacaggtaagcgaacagctatcgatttaggt
atacacggtttgcatcccgaaatgatccgtatgatcggtaaaatgaaatacagatcgtct
tatggtcaaaacttattgcagcatgctcgtgagacagccaatttatgtgcgataatggca
gctgaattgggtcttaacgtgaagaaagcaaaaagagcaggtctgttacatgatataggt
aaagtgccggatgatgagccggaattacctcacgcattgttaggtatgaagcttgccgaa
aaatataaagaaaaacctgatatttgtaatgcaataggtgctcaccacgatgagatcgaa
atgacaacattgctagcaccaattgttcaggtttgtgatgctatatcgggagcacgtccc
ggtgcacgtcgcgagatcgtagaggcttatatcaagcgtttgaatgatttggagcaattg
gcaatgtcttatccgggtgtgttaaaaacatatgcaatacaagccggtcgtgaacttcgt
gttattgttggagcagacaaagtggatgatgtggaaacagaaaaattgtcagctgaaata
gctaagaaaattcaagacgagatgacgtatcccggacaagtgaagattactgtaattcga
gaaactagagctgtaagtttcgctaaataa
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