Dysgonomonas sp. HDW5B: G7051_02960
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Entry
G7051_02960 CDS
T09584
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dyh
Dysgonomonas sp. HDW5B
Brite
KEGG Orthology (KO) [BR:
dyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dyh03009
]
G7051_02960 (rimO)
Enzymes [BR:
dyh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G7051_02960 (rimO)
Ribosome biogenesis [BR:
dyh03009
]
Prokaryotic type
ribosomal protein modification factors
G7051_02960 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIK53363
LinkDB
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Position
complement(741385..742689)
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AA seq
434 aa
AA seq
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MKKNRIDVVTLGCSKNLVDSEMLMKQLLANGYTVKHDPEKPEGEIVVINTCGFIGDAKEE
SINTILGFAEAKKSRKLNKLFVMGCLSERYMEELQAEIPEVDKFYGKFGWKGLITDLGKS
FRKDVQYERALTTPAHYAYLKISEGCNRSCSYCSIPIMTGRHQSRPMEEIVSEVESLVAQ
GVKEFQVIAQDLSYYGLDRYKEMKLPELIERISDVKGVEWIRLHYAYPTKFPYDLLRVIR
ERDNVCKYLDIALQHISDNMLTKMRRGITKQETLALVKRIRDEVPGIHLRTTFLVGHPDE
TEADFEELMQFVKEAQFERMGAFPYSNEEGTYAYEKYEDNIPEIVKQERMDMLMAVQERV
SLGVNESKIGQHLSVIIDREDADYYVGRTQYDSPEVDPEVLISKDIPLNKGEIYNVIITQ
AEPFDLYGNIVVPN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatagaattgatgttgttacgctaggctgttccaagaacctagtagattca
gagatgttaatgaaacagcttctggctaatggatatactgtgaagcatgatccggaaaag
cccgaaggtgaaattgtagttataaatacatgtggatttataggtgatgcaaaagaagag
tcgatcaatacgatacttggttttgctgaagctaaaaaaagcagaaagctgaataaactt
tttgtgatgggatgcctttccgaaagatacatggaagaacttcaggcagaaatacccgaa
gtggataaattctacggtaaatttggttggaaaggacttatcaccgatctagggaaatct
tttagaaaagatgtccaatacgagagagcattaacaactccggcacattatgcttatctg
aaaatatcagaagggtgtaatcgttcatgttcgtattgctctattcctattatgacagga
cgtcatcaatctcgccctatggaagagattgtatctgaagtagaatcgttggttgctcag
ggtgttaaggagtttcaggttatagctcaagacttatcttactatgggcttgatcgttat
aaagaaatgaaacttcccgaattaatcgaacgtatctccgatgtgaaaggtgttgagtgg
attcgtctccattatgcttatccgactaaatttccttatgatttgcttcgtgtaatacgc
gagagagataatgtatgcaaatacctggatattgcccttcagcatataagcgataatatg
ttgacaaaaatgagacgtggtataacaaaacaagaaactctggctcttgtaaagagaatt
agagatgaagttcctggaattcacctcagaaccacatttttggtgggacatccggatgaa
acggaggccgattttgaagaattgatgcagtttgtaaaagaggctcagttcgaacgaatg
ggagcttttccttattcaaatgaagaaggcacttatgcgtacgaaaaatatgaagataat
attcccgaaatagttaaacaggaaagaatggatatgttaatggctgtacaggagcgtgtc
tctttaggcgttaatgaatctaagatcgggcaacatctttcggtaattatagacagagaa
gatgccgattattatgtaggacgtacccaatatgattctccggaagtagatccggaagta
ttgatatcaaaagatataccgttgaacaaaggcgagatttataatgttattataactcag
gcagagccttttgatttgtatggaaatattgttgttcccaattga
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