KEGG   Dysgonomonas sp. HDW5B: G7051_03875
Entry
G7051_03875       CDS       T09584                                 
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
dyh  Dysgonomonas sp. HDW5B
Brite
KEGG Orthology (KO) [BR:dyh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dyh03036]
    G7051_03875 (xerD)
Chromosome and associated proteins [BR:dyh03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    G7051_03875 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_5 Phage_int_SAM_4 Phage_int_SAM_3
Other DBs
NCBI-ProteinID: QIK56204
LinkDB
Position
complement(958896..959801)
AA seq 301 aa
MNKSANIVSKYKSYLLLEKALSPNSIEAYLDDLTKLLKYFETEDLKLQQIRLEDLQQFVT
QLYDLGINARSVARILSGVRSFFNFLILDGYIQNDPTELLETPKIGLKLPVVLSLQEIEN
IISIIDLSTKEGQRNRAIIEVLYSCGLRISELTNLKFSDLFLDDGFIRVEGKGSKQRLVP
ISHTAIKEIGNYLLDRKHIDVKKGSEDMVFLSKRGTPISRIMVFHFIKQYADQAGIKKNI
SPHTFRHSFATHLLEGGANIRAIQQMLGHEKITTTEIYTHMDREYLRQEIIEHHPRNMDK
R
NT seq 906 nt   +upstreamnt  +downstreamnt
ataaataaatcggcaaatatagtatcgaagtataaatcgtatttgctattagagaaagca
ctttcgccgaactctatagaagcatatctggatgatcttacgaagctgctaaaatatttc
gaaacagaagatttgaaattgcagcaaatccgtcttgaagatcttcagcaatttgtaact
caattgtatgatttgggaattaatgcccgttctgtcgcacggatattatcgggcgtgagg
tctttctttaactttttgattttagatggctatatccagaatgatccgacagagttgttg
gaaacacctaagattggacttaagcttcctgtggttttgagtcttcaggaaatagaaaat
attatatccataatagatctttcgacaaaagaagggcagcgtaatcgtgctataattgaa
gtgctttatagttgcggactacgtatttcggaattgactaatcttaaattttccgattta
tttcttgatgatggttttattcgtgtcgaaggtaaaggaagtaaacagcgtttggtgcct
atctcacatacggcaattaaagaaattggtaattatttgcttgaccgaaaacatattgat
gtgaaaaaaggatccgaagatatggtgtttctcagtaaaagaggtactcctatatctcgc
attatggtatttcactttataaagcaatatgcagatcaggcaggaatcaaaaaaaatata
agtccccatactttccggcattcattcgccactcatttattggagggcggtgcaaacata
agggcgatacaacaaatgttgggacacgaaaaaataacgactactgaaatttatactcat
atggatcgtgagtaccttcgtcaggagataattgagcatcatccacgaaatatggataaa
cgataa

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