Dysgonomonas sp. HDW5B: G7051_09160
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Entry
G7051_09160 CDS
T09584
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dyh
Dysgonomonas sp. HDW5B
Pathway
dyh03030
DNA replication
dyh03430
Mismatch repair
dyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7051_09160 (dnaE)
03430 Mismatch repair
G7051_09160 (dnaE)
03440 Homologous recombination
G7051_09160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dyh03032
]
G7051_09160 (dnaE)
03400 DNA repair and recombination proteins [BR:
dyh03400
]
G7051_09160 (dnaE)
Enzymes [BR:
dyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7051_09160 (dnaE)
DNA replication proteins [BR:
dyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7051_09160 (dnaE)
DNA repair and recombination proteins [BR:
dyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7051_09160 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
HIN
Motif
Other DBs
NCBI-ProteinID:
QIK54498
LinkDB
All DBs
Position
complement(2248285..2252019)
Genome browser
AA seq
1244 aa
AA seq
DB search
MEPFIHLHVHSQYSLLDGQASIQRLVDKAKGDGMKALALTDHGSMFGIKEFYNYVKKKNA
PVFAEIKKIKAAIAEAKEGSPLLEELNKKLQEEESHLFKPILGCECYVAHRNRKLKEGKP
DMSGWHLIVLAKNLQGYKNLIKMVSQSWTEGFYMRPRIDKELLEKYHEGLIVSSACLGGE
IPKKITRGTPEEVDEAIQWFKNLFGDDFYLELQRHKTSRPDANLEVYPLQERVNQELLKL
SVKHNVKVIATNDVHFIGEEDSDAHDRLICLSTGKDLDDPKRMRYTKQEWLKTTAEMNEL
FKDIPHVLSNTLEIAEKVEYYSIDSDALMPFFDIDPSFGTEADYREKFTETDLITEFGDK
EYHRLGGYDKVIRIKLEADYLKHLTMIGAVKRYGENMNDETRERLEFELDVMKTMGFPGY
FLIVQDFIAAARRMGVAVGPGRGSAAGSAVAYCLGITDIDPIKYDLLFERFLNPDRISMP
DIDIDFDDDGRGEVLRWVTEKYGQERVAHIITYGTMATKSAIKDVARVQKLPLVQSNYLA
KLVPDRIPDKKKVTLKDAIEYVPELKQASNSTDLIMRDTMKYAQMLEGNVRNTGVHACGV
IIGQTAISDTVPVSTAEDKETGETMLVTQYEGSIIEETGLIKMDFLGLKTLSIIKEALEN
IKQTTGEDVDISTISLEDAKTYELYSQGKTTGTFQFESAGMQKYLKELQPSKFEDLIAMN
ALYRPGPMDYIPSFVARKHGREEIAYDIPIMERYLDDTYGITVYQEQVMLLSRLLADFTR
GQSDELRKAMGKKLIDKMNALKEKFLAGGKKNGHAEKTLNKIWADWEKFASYAFNKSHAT
CYSWIAYQTAWLKANYPSEYMAAVLSRNLSNITEITKFMDECKYMGMNVLGPDINESYLK
FSVNKAGDIRFGMAAIKGVGSGAVNDIIKERTLNGPYKTIFDLVERVNLSSCNKKNIESL
ALAGAFDNFPEITREQFFETNAKGETFIDQLVRYGNMYQIDKAQATNSLFGGDDIVLPTH
PEIPKAEKWSDLERLNKERELIGIYLSAHPLDEYAIALKYGCNVGMADIEDKEALRNKEV
TFGGLVCAAREGITKNGKPYMIIKIEDFTGSGEIPLFGDDYINFSKYGRLGLYVYVKARV
QGRRFNENQLELKIVSIQLLPDVKDQVIEKITITLPIHEMNAQMVEELSTLTKNNVGNSL
LYFEIVDGERNMKVELFARGLKINIRKELIDYLEENENIVFKVN
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctttatacatctgcatgtacattctcaatactcactgctcgacgggcaggca
agtattcaacgactcgttgacaaagccaaaggagatggtatgaaggctttagccttgacc
gatcacggatcgatgttcgggatcaaagagttttacaactacgtaaagaaaaaaaacgca
cctgtatttgccgaaataaaaaaaattaaagcggcaatagccgaagctaaagaaggaagt
cctcttttggaggagttgaacaaaaagcttcaggaagaagaatcccatttattcaaaccc
attttaggatgcgaatgttatgtagcccatcgaaaccgcaagttaaaagaaggaaaaccc
gatatgagcggctggcacttaatagtactggctaaaaacctgcaaggctataaaaatctg
atcaagatggtttcgcaaagctggacagaaggcttttatatgcgcccccgtatcgataaa
gaactactcgaaaaataccacgaaggactcatcgtatcatcagcttgtctgggaggtgaa
attcctaaaaaaataacacgcggaacccccgaagaagtagacgaagccatacaatggttc
aagaatcttttcggagacgatttttaccttgagcttcaacggcataaaaccagtcgtcct
gatgctaatcttgaggtatatccgcttcaggaacgtgtcaatcaagagctgttaaaatta
agcgtgaagcataacgtcaaagttattgcaaccaatgatgtgcattttatcggcgaagaa
gattcggatgcccacgatcgtctgatctgtctcagtacaggaaaagatctggatgacccg
aaacggatgagatataccaagcaggagtggttaaaaacaactgccgagatgaacgaactg
ttcaaggatatccctcatgtactatccaacacgctcgaaatagccgagaaagttgaatat
tactcgatagattcggatgctttgatgccattctttgatattgacccttctttcgggacg
gaagcagattacagagaaaagttcacagaaacagatcttatcactgaattcggagacaaa
gaatatcatcgcttaggaggatacgacaaagtaatccgaataaaactcgaagccgattac
ctgaaacacctgacaatgataggtgcagtaaaacgctacggagagaatatgaatgatgaa
acccgtgagcgtctggaatttgaattagacgttatgaagaccatgggattccccggatat
tttctcattgtacaagactttattgcagccgctcgcagaatgggtgttgcagtaggtccg
ggacgtggatcggcagcaggttctgctgtagcctattgccttggaattaccgatatcgac
cctattaagtatgacctactgtttgagcgtttccttaatcccgaccgtatatcaatgccc
gatatcgatatcgactttgatgatgatggacgtggagaggtgcttcgctgggtaacagaa
aaatacggacaagaaagggttgctcacattatcacatatgggactatggcaaccaaatcg
gcaatcaaagacgttgcccgtgttcaaaagctaccactagtacaatctaactacttagcg
aaactagttccggatagaatacccgataaaaagaaggtaacccttaaagatgccatcgaa
tatgtacccgaattaaagcaggcttcaaacagtacggatctcattatgcgcgacacgatg
aaatacgcacaaatgctcgaaggtaacgtacgtaacaccggagtgcatgcctgtggggtt
attattgggcaaactgctatttcggatacagttcccgtaagtactgccgaagataaagaa
acaggagaaacgatgttggtgacccagtatgagggatcgattatcgaagaaacgggactt
atcaagatggactttttgggtttaaaaaccctttcgattataaaagaagctctcgaaaat
ataaagcagactacaggagaagatgtagacatcagtactatttcgcttgaagatgctaag
acatacgaattatatagtcagggaaagacaacgggtacattccagtttgagtctgccggt
atgcaaaaatacctcaaagaacttcagccaagtaagttcgaagacttaattgccatgaat
gccctgtatcgtcccggaccgatggattacattccttcgttcgttgcacgtaaacatgga
cgtgaagaaatagcctacgatataccgattatggaacggtatcttgacgatacgtatggt
attacggtgtatcaggaacaggtcatgcttttgtctcgtctattggccgactttactcgt
ggtcagtccgatgagttacgtaaggcgatgggtaaaaagctcatcgacaagatgaatgcc
ctaaaggagaaattcttagcaggaggaaagaagaacggacatgccgaaaaaacgttgaac
aagatatgggctgactgggaaaagtttgcatcatacgctttcaacaaatcgcatgcaacc
tgttattcgtggatagcttatcaaacagcatggctcaaggccaactatccatccgaatat
atggcagctgttctatctcgaaacttgtcgaatatcacggaaatcaccaagtttatggat
gaatgcaagtacatgggaatgaatgtacttggtccggacataaacgaatcatatcttaag
ttttcggtaaataaagcaggtgatatacgcttcggaatggctgccataaaaggagtgggc
agtggagcggtgaatgatattatcaaggaacgaactctcaatggtccttataaaactata
tttgatctagtagaacgtgtaaatctatcctcttgtaacaagaagaatatagagtcactc
gctcttgccggagctttcgataatttcccggaaattacccgcgaacagttctttgaaaca
aacgctaaaggtgaaacttttatagaccagctggttcgttacggaaatatgtatcagatc
gataaggcacaagcgactaattcacttttcggtggagatgatattgttttgcctactcat
cctgaaattccaaaagcagaaaaatggtcagatctggaacgtttaaataaagagcgtgaa
ttgattggtatttacttatcagcccaccctcttgacgaatacgccatagcacttaaatat
ggctgcaatgttgggatggctgacattgaggacaaggaagctctaagaaacaaagaagta
acatttggagggttggtatgtgctgccagagaaggcattaccaagaatggtaaaccttat
atgatcatcaaaatcgaagattttaccggaagtggagaaatccctttgtttggagatgat
tacatcaactttagcaaatacgggcgtctcggactttatgtatatgtaaaagcacgtgtt
cagggacgaagatttaatgaaaatcagctcgaacttaaaatcgtatcgattcagctactt
cctgatgtgaaagatcaggttattgagaagataaccataacattgcctatccacgaaatg
aatgctcaaatggtagaagagctttcaactctgactaaaaacaatgtgggtaattcattg
ttatattttgagattgtcgatggtgaacggaatatgaaagttgaactctttgcccggggt
cttaaaattaatatacgcaaggaattaattgactatctggaagaaaacgaaaacatcgta
ttcaaggtaaattga
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integrated database retrieval system
