Dysgonomonas sp. HDW5B: G7051_13890
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Entry
G7051_13890 CDS
T09584
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dyh
Dysgonomonas sp. HDW5B
Brite
KEGG Orthology (KO) [BR:
dyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dyh03032
]
G7051_13890 (gyrB)
03400 DNA repair and recombination proteins [BR:
dyh03400
]
G7051_13890 (gyrB)
Enzymes [BR:
dyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G7051_13890 (gyrB)
DNA replication proteins [BR:
dyh03032
]
Prokaryotic type
DNA Topoisomerases
G7051_13890 (gyrB)
DNA repair and recombination proteins [BR:
dyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G7051_13890 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QIK55380
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All DBs
Position
3341317..3343275
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AA seq
652 aa
AA seq
DB search
MTDNEKNLASGSYSADNIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEALA
GYCNDIRVTILEDNSISVWDNGRGIPVGIMEKEQKSALEVVLTVLHAGGKFDKGTYKVSG
GLHGVGVSCVNALSTYLKAEVRREGKIHMLDFSCGKPLHEIQILGDSTETGTTITFTPDS
SIFITTEYKYDTLASRLRELSFLNAGIKLSLTDLRHKKDDGSYKSDTFFSEKGLEEFVRY
IDAAKEALIEDVIHINTEKQGVPVEVAITYNTSYNENVYSYVNNIHTIEGGTHLTGFRRG
LSRTLKKYADDMKMLDKVKVDISGDDFREGLTAVVSIKVAEPQFEGQTKTKLGNNEVMGA
VDQAVGEALGYYLEEHPKEAKIIVEKVILAATARYAARKAREMVQRKSPLTGGGLPGKLA
DCSSKDPVACEIFLVEGDSAGGTAKQGRDRGFQAILPLRGKILNVEKAMQHKVLESEEIR
NIYTALGVSIGTDDDTKELNLAKLRYHKVVIMTDADVDGSHIATLILTFFFRHMRPLIEL
GYIYIATPPLYLCKKGKVEEYCWDERQRQAFIDKYGEGNESAVHTQRYKGLGEMNASQLW
DTTMNPEHRTLRQVTIENGAEADHIFSMLMGEEVAPRREFIEENATYAKIDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacagataacgaaaaaaatctagcaagcggctcgtattccgccgacaatattcaagta
ttagaaggtcttgaagctgttagaaagagacccgccatgtatattggtgatataggtgaa
aaaggtttacatcacttggtttatgaagtcgtcgataactctattgatgaggctttagct
ggttattgtaatgatattagagtaactatcctggaagataattctatctccgtatgggat
aacggacgtggtattcctgtgggaatcatggaaaaggagcagaaatcggctctagaggta
gttttaaccgttcttcatgccggaggtaaattcgacaaaggaacttataaagtttccgga
ggtcttcacggagtaggggtatcttgtgtgaatgcactttctacttatctgaaagccgaa
gtacgaagagaaggcaaaatacatatgctcgatttttcgtgcggaaaaccactgcatgag
attcaaatattaggagactcaacagaaacaggtacaaccattacatttacacccgacagc
agtatatttataactacagaatataaatacgatactctggcttctcgtttacgtgaactt
tcgttcctgaatgcgggtattaagttgtcattgactgacctgagacataaaaaagacgat
ggttcttacaagtcggatactttcttttcagaaaaaggtcttgaagaattcgttagatat
atagatgcagctaaggaggctctgattgaggatgttatacatataaataccgaaaaacaa
ggggttcctgtagaagttgccataacatataatacatcttataatgagaatgtatattca
tatgtaaataatatccatacaatagaaggtggtactcacttaaccggtttccgcagagga
ttgtcgcgtactttgaagaagtatgccgatgatatgaagatgttggataaagtgaaagtg
gacatcagtggtgatgacttccgtgaggggttaaccgctgttgtatctattaaggttgct
gaacctcagtttgaaggacagaccaaaactaaattgggtaacaatgaggtgatgggggct
gtagatcaggcagtaggtgaggccttaggttattatctggaagaacatccgaaagaagcc
aaaataattgtagaaaaagtaattcttgccgctacagctcgttatgcagctcgtaaagct
cgtgagatggtacaacgcaaatcgccgcttacaggtggaggattgcccggtaaattggct
gactgttcgagtaaagatcctgttgcttgtgaaatattccttgtcgaaggggattctgcg
ggtggtacggcaaaacaaggtcgcgaccgtggttttcaggctattttaccattgagaggt
aaaattctgaatgtagagaaagcgatgcaacacaaagtgctcgagagtgaagaaattaga
aatatatatacagctcttggagtttctattggtaccgatgatgatactaaagaattgaat
ttagcaaaacttcgttatcataaggtggttatcatgaccgatgccgatgttgacggtagt
cacattgcaactttgattcttacttttttcttccgtcatatgagaccccttattgagctg
ggatacatctatattgctacgcctcctctttatttatgtaaaaaaggtaaagttgaagag
tactgttgggatgaaagacaacgtcaggcatttatcgataaatatggcgaaggaaatgaa
agcgctgttcatactcaacgatacaaaggtcttggagagatgaatgcttctcagttatgg
gatacaaccatgaatcctgagcatagaacacttcgtcaggtaaccattgagaatggagca
gaagccgaccatattttctctatgttgatgggtgaagaagttgctccgcgacgtgagttt
attgaggaaaatgcaacctatgcaaaaatagatgcataa
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