Dysgonomonas sp. HDW5B: G7051_14985
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Entry
G7051_14985 CDS
T09584
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dyh
Dysgonomonas sp. HDW5B
Pathway
dyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7051_14985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dyh03019
]
G7051_14985
03400 DNA repair and recombination proteins [BR:
dyh03400
]
G7051_14985
Enzymes [BR:
dyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7051_14985
Messenger RNA biogenesis [BR:
dyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7051_14985
DNA repair and recombination proteins [BR:
dyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G7051_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Rep_fac_C
zf-CXXC
Cas3-like_C_2
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
QIK55579
LinkDB
All DBs
Position
complement(3629708..3631618)
Genome browser
AA seq
636 aa
AA seq
DB search
MNIFHKILREYWGYSEFRPLQENIIKSIFSGKDTLGLMPTGGGKSITFQVPALAMDGICL
VITPLIALMKDQVDNLKEKGIKALSIYSGMSHNEIMITLDNAILGDYKFLYISPERLGTP
LFLTKIRSMNVCLLAIDESHCISQWGYDFRPSYMNIADIRKELPNVPVLALTATATPEVT
DDIQNILGFKEKNVFRKSFERKNLSYIVRESDNKTESLIKILSKINGSAIVYVRSRLRTK
EIATELIQQGLSADFYHAGLSSDEKTRKQNAWKNNECRIIVSTNAFGMGIDKPDVRVVVH
IDLPNSIEEYYQEAGRAGRDEQKAYAVILYSKTDSTKLKKRIDDEFPEREFVIRVYESLA
YFFQIAEGFGLNSAYDFSLHQFCSIYKYPLIPTHNALKIIELAGYIEYTDETDNQSRVIF
SIYRDELYKYEFSPEYEHLINVVLRLYTGIFADYVTINEGTIALHLKKSRTEVYQMLKIL
AKKRIIEYIPFKKTPFIIYKQPRVSIKYLVISQTVYEVRKKRFEKRIKGITEYAERNDIC
RSRMLLSYFGEGKSKDCGQCDVCLAKSDTGLNNYKFNDISEKIGQLITYKNYSIDDIINE
ISEYKEEDIINTIRFHLDNETYFFEDDYLKHSKKKE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatttttcataaaatactacgtgaatactggggatattctgaattcagaccttta
caggaaaatatcatcaaaagtatcttttcaggaaaagacactttaggacttatgcctaca
ggaggaggaaagtctattacttttcaggttcctgctttggcgatggatggtatttgcctt
gttattaccccccttattgccctaatgaaagatcaggtagataacctgaaagaaaaaggt
ataaaagcattatctatatattcaggaatgtctcacaatgagataatgataacattggat
aatgcgatcttgggcgattacaaatttctttatatatcacctgaacgattaggtacaccg
ctattccttactaaaattcggagtatgaatgtgtgtcttttggctattgacgaatctcac
tgtatctcacaatggggatatgacttccgcccgtcatatatgaatattgcagatatacga
aaggagctcccaaatgttcctgtcttggcacttacagctactgcaacgcccgaagtcacc
gatgacattcaaaacattctgggattcaaagaaaagaatgttttcagaaaaagcttcgaa
cgaaaaaacctatcctatatagttcgtgaaagtgataataaaaccgaatcactcataaaa
attctatctaaaatcaatggaagtgctattgtatatgtacgcagtcgattacggacaaaa
gaaatcgctacagaactaatacaacaaggactttctgccgatttctaccatgccggattg
agtagcgatgagaaaactcgtaaacaaaatgcctggaagaataacgaatgccggattata
gtttcgactaatgctttcggtatgggaattgacaaacccgatgttcgtgttgtagtgcat
atagacttacccaattctatcgaagaatattatcaagaagcaggacgtgcaggcagagac
gaacaaaaggcttatgctgttatattatattctaaaacagatagtacaaaacttaagaaa
cgtattgatgatgagtttcctgaacgtgaatttgtaatacgtgtatatgaatctcttgca
tatttttttcaaatagccgaagggtttggtcttaactcagcctacgacttcagtttacat
caattctgttccatttataagtaccctcttatcccgactcataatgctctaaagataata
gaattggccggatatatcgaatacacagatgaaaccgataatcaatcgagagtaatcttt
tctatctatcgggatgaactatataagtatgagttttctccggaatacgagcatcttata
aatgtagtattgagattatataccggtatattcgctgactatgtaactataaatgaagga
acaattgcattacatctcaaaaagagcagaacagaagtctatcagatgcttaaaatattg
gctaaaaagcgaataatagaatacataccttttaaaaagactcctttcataatatataaa
cagcccagggtttccataaaatatctggtaatttctcaaactgtatatgaagtaaggaaa
aagagattcgagaaacgaattaaaggaattaccgaatatgccgaacgcaatgacatttgt
cgcagtagaatgctgttgagctattttggagagggcaagagtaaagattgcggacagtgt
gacgtatgccttgctaaatctgatacaggcctcaataattacaaatttaatgatatatca
gaaaaaataggacaattaataacttacaagaattactctatcgatgatataatcaatgaa
atatcagagtataaagaagaagatataatcaatacaatacgattccatctcgacaatgag
acttatttttttgaagacgattacctaaagcacagcaaaaagaaagagtag
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