Dysgonomonas sp. HDW5A: G7050_03470
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Entry
G7050_03470 CDS
T06482
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dys
Dysgonomonas sp. HDW5A
Pathway
dys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7050_03470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dys03019
]
G7050_03470 (pnp)
03016 Transfer RNA biogenesis [BR:
dys03016
]
G7050_03470 (pnp)
Enzymes [BR:
dys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G7050_03470 (pnp)
Messenger RNA biogenesis [BR:
dys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7050_03470 (pnp)
Transfer RNA biogenesis [BR:
dys03016
]
Prokaryotic type
tRNA degradation factors
G7050_03470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
BAF1_ABF1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QIK58949
UniProt:
A0A6G7X3D1
LinkDB
All DBs
Position
840437..842623
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AA seq
728 aa
AA seq
DB search
MIKPITKSIDLGDGRSITLETGKLAKQADGSVMLRMGDTMLLATVCAAKDANPGVDFMPL
QVEYKEKFAAAGRYPGGFLRREGRASDSEILVCRIVDRVLRPLFPDNYHAEVFVTITMFS
SDGIDMPDALAGLAASAALAVSDIPFNGPISEVRVGRIDGKFVVNPTFQQLAQADMDIMV
GATIDNIMMVEGEMKEVSEAEMLEAIKVAHEAIKVQCQAQIELMELCGTTVKREYCHEVN
DEDLRKDVWDKCYDKAYVIAASCNTNKHERIANFKAIVDEYKAALTPEELAEKGALISRY
YHDVEKEAMRRSILDEGKRLDGRSTTEIRPIWSEVDYLPGAHGSAVFTRGETQSLTTVTL
GTKLDEKIIDDVLFNGKERFLLHYNFPPFSTGEARPQRGVGRREIGHGNLAHRALKPMIP
ANYPYVIRIVSDILESNGSSSMATVCAGTLALMDAGVNIKKPVTGIAMGLISENKGTNFA
VLSDILGDEDHLGDMDFKVCGTKDGITATQMDIKVDGLSFEILEKALNQAREGRLHILGK
VLETLSGPREDLKPNAPRIEIIMIAKEFIGAVIGPGGKIIQGIQEETGATVTIEEIDNQG
RVEISATNKASIDAAMARIKGIVTVPEIGEVYTAKVRSIMPYGAFCEFLPGKDGLLHISE
LSWDRVETIEESGLKEGDMIEVKLVDVDAKTGKIKLSRKALLPRPPRPDRPVVKKDGEAP
QTEAPAAE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccgattacaaaaagtatcgatttaggtgatggaaggtctatcaccttagaa
acaggaaaactagcaaaacaggcagatggttctgtaatgctaagaatgggtgacaccatg
ttattggcaacagtatgtgccgcaaaagatgcaaatccaggtgtagactttatgcctttg
caagttgaatataaagagaagtttgctgcggcaggccgttatcccggaggtttccttcga
cgagagggacgtgcttcagattctgaaattctagtatgccgaatagtcgaccgagtacta
cgtcctctattccctgataattatcatgctgaagtatttgttactataaccatgttttct
tcagacggtatagatatgcctgatgcattagccggacttgcagcttctgcagctcttgct
gtatcggatattcctttcaatggacctatatctgaagtgagagttggtcgtattgatggc
aaatttgtagtaaatcctacattccaacaattagcgcaagcagatatggacatcatggtt
ggtgccactatcgacaatataatgatggtagaaggtgaaatgaaagaagtttcggaagca
gaaatgcttgaagctatcaaagttgcacacgaagctattaaagtacagtgccaggctcag
atcgaactgatggagctttgcggaacaactgtaaaaagagaatactgtcatgaagtaaat
gacgaagacctacgcaaagatgtttgggataaatgttatgataaagcatatgtaattgct
gcatcatgtaacacaaacaaacacgagcgtattgctaattttaaagcaattgtagatgaa
tacaaagctgctttaactccagaagaattagctgaaaaaggagcattgatctctcgttat
tatcacgatgttgagaaagaagctatgcgtcgttctatccttgatgaaggaaaacgtctg
gatggtcgttcaactactgaaatccgcccaatctggtctgaagtagattatctacccgga
gctcacggatcggcagttttcactcgtggggaaactcagtcattgacaactgttacatta
ggtacaaaattagacgagaaaattatcgatgatgttttattcaacggtaaagaacgtttc
ttgttacattataacttccctccattttctaccggtgaagctcgtccacaaagaggagta
ggtcgtcgcgaaattggtcacggaaacttggcccaccgtgctttgaaaccaatgattcct
gcaaattatccatatgtaatacgtatagtatctgatatcttggaatctaatggatcatct
tcaatggcaactgtttgtgccggaactttggctctgatggatgcaggggtaaatattaag
aaacctgtaacaggtatcgcaatgggacttatctctgaaaacaaaggaactaactttgct
gtactttctgacattttaggagacgaggatcacttgggtgacatggactttaaagtttgt
ggaactaaagatggtatcactgcgactcaaatggatataaaggtagacggtttgtctttc
gaaatcttggagaaagcattaaaccaagctcgtgaaggtcgtttacacatcttaggtaag
gtattggaaactctatcgggacctagagaagatcttaaaccaaatgctccacgtatcgaa
ataataatgatcgctaaagaatttatcggcgctgttatcggaccgggtggaaaaatcata
caaggtattcaagaagaaacaggtgctactgtaactattgaagagatcgataatcaagga
cgtgtagaaatatctgcaaccaacaaagcttctattgatgctgcgatggctagaatcaaa
ggtattgttactgttcctgaaataggagaagtatacactgcaaaagttcgctcgataatg
ccatacggtgctttctgcgaattcttacccggaaaagacggtttacttcacatctctgaa
ctatcatgggatcgtgttgaaactatcgaagaatcgggtcttaaagaaggtgatatgatt
gaagtaaaactggtagatgtggatgctaaaacaggcaaaatcaaactatctcgtaaagct
cttcttcctcgccctcctcgtcctgacagacctgtggtgaaaaaagatggcgaagctcct
caaacagaagctcctgctgctgaataa
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