Dysgonomonas sp. HDW5A: G7050_03820
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Entry
G7050_03820 CDS
T06482
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dys
Dysgonomonas sp. HDW5A
Pathway
dys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7050_03820 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dys03019
]
G7050_03820 (recQ)
03400 DNA repair and recombination proteins [BR:
dys03400
]
G7050_03820 (recQ)
Enzymes [BR:
dys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7050_03820 (recQ)
Messenger RNA biogenesis [BR:
dys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7050_03820 (recQ)
DNA repair and recombination proteins [BR:
dys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G7050_03820 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QIK59014
UniProt:
A0A6G7X345
LinkDB
All DBs
Position
913475..915661
Genome browser
AA seq
728 aa
AA seq
DB search
MSKREDLLIENLKKHFGFDKFKGNQEAIIQNVLEEKDTFVLMPTGGGKSLCYQLPAILME
GTAIIISPLIALMKNQVDAMRNFSEEDGIAHFLNSSLNKASIELVKADVISGKTKLLYVA
PESLTKDENIEFLRQIKVSFYAIDEAHCISEWGHDFRPEYRRIKPIIMEIGQRPLVALTA
TATPKVQHDIQKSLGMLDAKIYKSSFNRENLYYEVRPKTDKVDRDIIRYIKSQEGKSGIV
YCLSRKKVEEFAEILRANNINALAYHAGLDASTRGENQDSFLMEKVDVIVATIAFGMGID
KPDVRYVIHYDMPKSLEGYYQETGRAGRDGGEGRCVAFYSYKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAETAMCRRIVLLHYFGEKYNQHNCGNCDNCINPKKQVEAQDLLLTAIE
AVLALKEKFKTEYVINFLRGKETSEIETYGHQDLEAFGSGEDTDEDTWNAVIKQGLIAGY
LDKDIENYGLLKITKKGKDFLKKPVSFKIAQEEDFDDESDDEVVIKGGGGSSAVDPVLFS
IMKDLRKKMSKKLNVPPYVIFQDPSLESMATIYPTSIDELQNIPGVGAGKAKRYGAEFVE
IIKKHVEENEIERPEDLRVRTVANKSKLKVAIVQSIDRKVALDDLAESKGIEFPELLAEL
EAIVYSGTKINIDYFLNEVIDEDHMADIFDYFQEAESDDLEDAINELGMYTEEEIRLVRI
KFISDMAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgagaagatctattaattgaaaatctaaaaaaacattttgggtttgataag
ttcaagggtaaccaggaggctatcatacagaatgttttggaggaaaaagatacttttgtt
ttgatgccgacaggagggggaaaatctctttgctatcagcttcctgcgatattgatggag
ggtactgcgattatcatatccccattaattgcattgatgaaaaatcaggttgacgccatg
cgcaacttcagcgaagaagatggtatagctcattttttgaattcatccttaaacaaagct
tccattgagttggtaaaagcggatgtaatatcgggcaaaacaaaattattatatgttgct
cccgaatctttaactaaagatgaaaatattgagtttttgcgacaaataaaagtttcgttt
tatgcaatagacgaagctcactgtatatcggaatggggacatgatttcaggcccgaatac
agacgcatcaagcccatcatcatggaaatcggtcagcggccgcttgtcgctttgacagca
acagcgacacctaaggtgcagcacgacatccagaagagtctgggaatgttggatgcaaaa
atttacaaatcatcttttaatcgcgaaaatctttattacgaagttcgaccaaagactgac
aaggtagaccgggatattatccggtatatcaaatctcaggaaggaaaatcgggtatcgta
tattgcttaagcagaaaaaaagtagaagaatttgctgaaattctgcgggcaaataatata
aatgcgcttgcttaccatgccggcttggatgcctcgacccgtggcgagaatcaagactct
tttttgatggaaaaagtggacgtcattgtagccacaatagccttcggtatgggtatcgac
aaacccgatgtaagatatgtcatacattatgacatgcctaaaagcctcgaaggatattat
caggaaacaggacgtgcaggacgtgatggaggtgaaggtagatgtgtagcattctattcg
tataaagaccttcagaaactcgaaaaatttatgcagggtaagcctgttgccgaacaagaa
attggcaaacagcttcttcttgaaacagcagcttatgctgaaacagcaatgtgtcgtaga
attgttctactacactatttcggagaaaaatataatcaacataactgtggtaattgtgac
aattgtataaaccctaaaaaacaagtggaagctcaagacttattattaacagcaatagaa
gctgtattagcattaaaagaaaaattcaaaactgagtacgttattaatttccttagagga
aaagaaacgtcagaaattgagacctatggtcatcaggatttagaagcattcggatctgga
gaagatactgatgaagacacctggaatgccgtaattaaacaaggtctgattgccggttat
ttagacaaagacatagaaaactatggtctacttaaaattacaaaaaaaggaaaagacttt
ttaaagaagccggtttcattcaagatagctcaggaagaggattttgatgatgagagtgat
gatgaagtggttatcaaaggcgggggcggaagctcggctgtagatccagtattattctct
atcatgaaagaccttcgtaagaagatgtctaaaaaattaaatgttcctccttatgttatt
ttccaagatccttcgttggaatcgatggcaaccatctacccgacaagtatcgacgaacta
cagaacatccccggtgtaggagcaggtaaagctaaaagatacggtgccgaatttgttgag
attataaagaagcacgtagaagaaaatgagattgagcgtccagaagacttaagagtaaga
acggtagctaataaatcgaaattaaaagtggctatagtacaaagtatcgaccgcaaggtt
gctttggacgatcttgcagaatcgaaaggtatagagtttcccgaattactggcagaatta
gaagctatagtttactcaggaactaagataaacattgattatttcttgaatgaggtaata
gatgaagaccatatggcggatatcttcgattattttcaggaagcagaatcagacgatctc
gaagatgcaataaacgaactgggtatgtataccgaagaggaaatacgtctggtaagaatt
aagttcatctccgatatggcaaactaa
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