Dickeya zeae: W909_03100
Help
Entry
W909_03100 CDS
T03567
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dzc03016
]
W909_03100 (truB)
Enzymes [BR:
dzc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
W909_03100 (truB)
Transfer RNA biogenesis [BR:
dzc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W909_03100 (truB)
Prokaryotic type
W909_03100 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJC65145
LinkDB
All DBs
Position
656251..657207
Genome browser
AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERPVTFTHDALMLALDSFRGDTQ
QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEADELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVMYLRRLQVATYPTERMVTLEQLQTLREQAEAQEQPIGDLLDVL
LLPMDTAVQAFPEVNLSPVVAGYLKLGQAVRATAVPTDGMVRITEGDEHRFIGMGEIDDE
GRVAPRRLVVENPEPTGV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgccgtcgtggtcgtgatatccacggcgttctactgctggataaacca
caaggggcgtcatctaacgatgtcctgcagaaggtaaagcgcctcttcaatgccaacaaa
gccgggcatacgggcgcactggatccattggcgaccggtatgctgccgatatgtctgggt
gaagcgaccaagttttcccaatacctgctggatgccgataagcgttaccgggtgatagcc
cgtctggggcaacggaccgatacgtctgatgccgacggtaatgttatccaggaacgtccc
gtcacatttacgcatgacgcgttaatgctggcgctggacagctttcgcggcgatacccag
caggtaccgtcgatgtattctgctctgaaataccagggccgcccgctctacgagtacgcc
cgtcaagggctggttgtgccgcgggaagcgcgtgacatcaccgtctatgagttgcagttt
atccgctgggaagccgacgaactggagctggaaatccactgctccaagggaacgtacatc
cgtaccatcattgatgatctgggtgagaagctggggtgtggcgctcatgtgatgtatctg
cgccgtttgcaggtggcgacgtatcctaccgagcgtatggtcacgctggagcagttacag
acgctgcgtgaacaggcagaagcacaagaacaaccaattggtgacttgctggatgtactg
ctgttaccaatggataccgctgtgcaggcgtttccagaggtgaatctgtcaccagtggtg
gcgggttaccttaaacttggccaggccgtgcgtgctaccgctgtaccgaccgatggcatg
gtgcgaatcactgagggtgacgaacaccgattcatcggtatgggtgaaatcgatgatgaa
ggacgggtggcaccgcgccgtctggtagtcgaaaaccctgagccgacgggtgtctga
DBGET
integrated database retrieval system
