Dickeya zeae: W909_07145
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Entry
W909_07145 CDS
T03567
Name
(GenBank) transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dzc03000
]
W909_07145
Transcription factors [BR:
dzc03000
]
Prokaryotic type
Helix-turn-helix
Other families
W909_07145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF_3
GAF
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
HTH_8
AAA_19
AAA_3
PhoH
HTH_50
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJC65853
LinkDB
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Position
1577535..1579703
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AA seq
722 aa
AA seq
DB search
MATRLTDSPSRLSILWQDALLKISQSLLQQRTLPDLLQCLDGVSFSVVRFGRVNVILLDP
LRNQMHFYRHDRDSGRTLCSEEAILLANGPGGVVWSTQTVLHCDRTHFQRDFPHLTDLPA
YAGLSDYCQLPLRGTQRVLGGVEFLKTDGSRFTDSELDFFQALAGVVALVVENIREREQV
LQEEERLRHERDHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKDGEEQ
DNPLKYLATVYPASGAPKTVQGEVERAQTLADSVMAQHQPQLIDVPTRLAAKDPRPLCQW
FDRELSHVCLLPLVFGNRTLGVLELAHRTALAVSEADLRLLRQIAARIAIALDNALAYEQ
ITRLKDSLIHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVAMVAASDSTVLI
LGETGTGKELIARAIHSLSQRKSQRMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQG
RFELADNSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKIIPVNVRLIAATNRDLKQ
MVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLR
QLSRLPWPGNVRELENVVERAVILTRGTTLNLHMDELQHHLSPLDVPKPAHHEIMPTVEP
TPVPQEADDESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISAREIEG
IS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgactgacagactccccgtcccggctgtctattctctggcaggatgccttg
ttgaaaatttctcagtcgctgttgcaacagcgcaccctacctgatctgttgcagtgcctg
gacggtgtgtcgttctcggtggtgcggtttggtcgcgtcaacgtcatcctgctcgaccct
ttgcgtaaccagatgcatttctaccgccacgatcgtgactccgggcggacgctgtgtagc
gaagaggcgattctgctggccaatggccccggtggtgtcgtgtggagcactcaaaccgtg
ctgcactgtgaccggacacactttcagcgtgatttcccccatctgaccgatctgcccgcc
tacgccggattaagcgactattgccagttgccgctgcgtggcacccagcgagtactgggc
ggggtcgaatttctcaaaaccgacggcagccgctttactgacagcgaactggattttttt
caggcgctggcaggcgtggttgcactggtggtggaaaatattcgtgagcgtgagcaagtg
ttgcaggaagaagagcggttgcgccacgagcgggatcacctgcgtattctggtggatgtc
accaataccgtgatttccaaactggagctgaaagcgctggcgctggaggtgtcgcgcgag
atccaccgcttctttggtattgattttatcgcgctggtgctgaaagacggcgaagagcaa
gacaacccactgaagtatcttgccacggtgtatccggcatccggcgcacccaaaaccgta
caaggcgaagtggagcgggcgcaaacactggctgacagcgtgatggctcaacatcagccg
caactgatagacgtaccgacacgactggcggctaaagacccacgtccactttgtcagtgg
tttgaccgtgagttgtctcatgtgtgtctgttgccgttggtattcgggaaccgcacactc
ggtgtactggagctggcgcatcgcactgcgcttgctgtgagcgaggctgacctgcggctg
ctgcggcaaattgctgcccgcatcgccattgcgctggataatgcgctggcgtatgagcaa
attacccggctgaaggattcgttgatccatgaaaacttctatctgacggagcaactgacc
gaacatatccatcagcgcagtggcgacgagtttggcgagattattggccgtagcgcagcg
attcgacaggtactggaacaggtggcgatggtcgccgccagtgacagtacggtgttgatt
ttgggagaaacgggcaccggtaaagagttgattgcccgcgctattcatagcctgagccaa
cgtaaatcacaacgcatggtgaaaatgaattgtgccgcgattccttctggcctgttggaa
agcgacctgttcggacatgagaaaggggcgtttaccggcgcgaccagccagcgtcagggg
cgctttgagctggcggataacagcacgttatttttagatgaagttggggatattccgctg
gagttgcagcccaagctactgcgggtactacaggagcgggagatagagcggctgggcggc
agtaagattatcccggtgaatgtgcggttaattgccgcgactaaccgtgacctgaaacaa
atggtggcggaccgtgagtaccgtagcgatctttactatcgcctcaatgtgttcccgatt
gttattccgccgttacgtgagcgaccggaagacatcccactgctggtgaagttttttacc
cgcaagatagcccgtcgtatgaaccgtactatcgacagtatcccttccgatatgctgcgt
cagttgagtcgcttgccgtggcccggcaacgtgcgggaactggaaaatgtggtggagcgg
gcggtgatcctgacacgcggcaccacgctcaacttacatatggatgaactccagcaccat
ttgtcgccgctggatgtgcccaaacccgcgcaccatgagattatgccgacagtagagccc
actcctgtgccgcaggaggccgacgacgagtcagaacgcgagcgcatcatccgggtttta
cgggaaaccaatgggattgttgctggcccgaaaggcgcggcggcacgccttggccttaaa
cgcaccacgttattgtcgcgtatgcagcgtatggggatttccgcccgggaaattgaaggg
atttcgtaa
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