Dickeya zeae: W909_10020
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Entry
W909_10020 CDS
T03567
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dzc
Dickeya zeae
Pathway
dzc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
W909_10020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzc03400
]
W909_10020
Enzymes [BR:
dzc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
W909_10020
DNA repair and recombination proteins [BR:
dzc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W909_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
NTPase_1
AAA_28
T2SSE
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AJC66383
LinkDB
All DBs
Position
complement(2213316..2215361)
Genome browser
AA seq
681 aa
AA seq
DB search
MTLTHHDDVVQLLDQWVDCGWLRELDRALVRFLHQECPEASPLLLLGAALVSYQLGRGHV
CLDLAATLADSGFSLALPPEGDRSDNRKIARPAQALAGVTLSAWLAALQQPQLVAPGEGA
TPLVLVGSRLYLRRYWQYEQDVRQAITRQLRHNETLRVAIAPAALRQRLEALFPATTSNT
TNWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALEQQGKPLRIRLAAPTGK
AAARLNESIAGAIASLTLDGLAQGEAIRTHINSEVVTLHRLLGSRPDTRHFRHHADNPLL
LDVLVVDEASMVDLEMMAALLAAMPCDSRLILLGDKDQLASVEAGALMGELCQRAAQGHY
LPQTRDWLREVTGEAPDDELLDPQGNALDQSIVMLRHSYRFGADSGIGKLADAVNAGDSA
ALASVWQQGFADLAQLTLTASDDNTLREWVIDGAASRFGARPGTSAPVGYGDYLRRMAST
RPALTASSDEFDTWATEILAAFGQFQLLCALRNGPWGVESMNERIAHLLYRERLLAGWQG
WYPGRPVMVTRNDYGQRLMNGDIGITLTVPQTQPDGSRLWVTRVAFPVGDGSSGIRWMMP
GRLSAVETVFAMTVHKSQGSEFAHTALLLPDSLSPILTRELVYTGITRAKQAFSLGCVGE
HSSVLAEAVSRRVLRVSGLVE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcactcaccatgatgacgtggttcaactgctggatcagtgggttgattgcggg
tggttgcgcgagttggatcgcgcgctggtgcgctttctgcatcaggaatgcccggaggca
tcaccgctgttgttgctgggcgcggcgctggtcagttaccagcttgggcgcgggcatgtg
tgcctcgatctggccgctacgctggctgacagcgggttctcgctggcgctgccgccggaa
ggcgatcgcagtgacaaccgtaagatagcgcgcccggcacaggcactggcgggggtgacc
ctgtcagcctggctggcggcgttgcagcagccacaattggtggcgccgggcgaaggggcg
accccgctggtgttggtgggatcgcgtctttatctgcgccgttactggcagtacgagcag
gatgtccgtcaggcgattacccgacagttacggcacaacgaaaccttgcgtgtagccatc
gcaccagcagcactacgccagcggctggaggcgctatttcctgcgacgacatccaacact
accaactggcagaagctggcttgtgcactggcggcgggcagtgcctttagcatcatcacc
ggtgggccggggaccgggaaaaccaccacggtggtgaaattgctggcgctgttgcagtca
ctggcgctggagcagcagggcaaaccgctgcgtatccgactggcggcaccgaccggcaag
gcagcggcgcgactaaacgaatccatcgctggcgctattgccagcctgacgctggacggt
ctggcgcagggagaggcgattcgtacgcacattaacagcgaggtggtaacgctgcatcgc
ttgctgggtagccgaccggatacccgacatttccggcaccatgctgataatccgctgctg
ctggatgtgctggtagtggatgaggcctcaatggtggatctggagatgatggcggcgtta
ctggccgccatgccgtgcgattcccggctgattttgctgggcgacaaggatcaactggcg
tcggtcgaggcgggggcgctgatgggggaactctgccaacgcgccgcccaagggcattac
ctgccgcagacccgtgactggctgcgcgaggtgaccggagaggcaccggatgacgagttg
cttgacccgcagggcaatgcgctggatcagtctatcgttatgctgcgccacagttaccgt
tttggtgctgacagcggcatcgggaaactggctgatgcggtcaacgcgggagatagcgcg
gcgctggcgtctgtctggcaacaggggtttgctgatttggcgcaactgacactcaccgcg
agcgatgacaatacgttgcgtgaatgggttatcgacggtgctgccagccgattcggtgcc
cgaccggggacgagtgccccggtgggctacggtgactacctgcgacgcatggcgtcgact
cggccagcgctgacggcatcgtcggacgagtttgatacctgggccacagagattctggcg
gcgtttggtcagttccagttgctgtgtgcgttgcgtaacgggccgtggggcgtggagagc
atgaacgaacgcatcgcccatttgctgtatcgggaaaggctactggctggctggcaaggc
tggtatccgggaagaccggtgatggtgacccgcaacgattatggccagcggctgatgaac
ggtgacatcggcattacgttgacggtaccgcagacgcagccggacggttcccgactatgg
gtcacccgggtcgcgttcccggtcggtgacggctcctcaggcattcgctggatgatgccg
gggcggttgtcggcagtggaaacggtgttcgccatgacggtgcataaatcgcaagggtcg
gaattcgcccacaccgcgttgctgctacccgatagcttaagcccgattctgacccgtgaa
ctagtttacaccggcatcactcgtgcgaagcaggccttcagccttggttgtgtcggtgaa
cacagttcggtgctggcagaggcagtcagccgacgggtactccgggtcagcggactggtg
gagtag
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