Dickeya zeae: W909_10340
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Entry
W909_10340 CDS
T03567
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
dzc
Dickeya zeae
Pathway
dzc00040
Pentose and glucuronate interconversions
dzc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W909_10340
Enzymes [BR:
dzc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
W909_10340
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AJC66447
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Position
complement(2289079..2290245)
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AA seq
388 aa
AA seq
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MAKGKKLSFTFHSYQDSVTGTEVVRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFDGPW
NYYLLDLKTQQATQLTEGTGDNTFGGFLSPNDDALYYVKNVRNLMRVDLNTLEETNIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRIDLKTGEA
TTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAPGESC
THEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNYDGTLMVGD
GCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTP
DDKHILFTSDVDGKPALYLAKVPDSVWH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaaaagctttcttttacgttccattcctaccaggattcagtcaccggc
accgaagtggtgcgtctcacccctcctgatgtcatctgccaccgcaactacttctaccag
aagtgtttttccaatgatggtagcaaactgctgtttggcggggcatttgatgggccgtgg
aactattatttgttagacctgaaaactcagcaggctactcaactgaccgaaggtactggc
gacaatacctttggcggcttcctgtctccgaacgatgacgcactgtattatgtgaagaat
gtccgcaacctgatgcgcgttgatcttaacacactggaagaaaccaatatctatcaggta
ccggatgactgggtcggatacggtacctgggtcgccaactctgattgcaccaagatggtg
ggaatcgagatcaaaaaagaagactggaagccgttgactgactggaaaaaattccaggag
ttctatttcaccaacccatgctgccgcctcattcgtatcgaccttaaaaccggtgaagcc
acgactattttgcaggaaaaacaatggttgggtcatccgatttaccgtcctggtgacgat
aatacggtcgccttctgtcacgaaggcccgcatgacctggtggatgcccgcatgtggttt
atcaatgaagatggtaccaacatgcgcaaagtgaaagagcatgcgccaggtgaaagctgt
actcatgaattctgggtgccgaatggctctgcactggcttatgtttcttatctgaaaggc
agcactaaccgctttatttgcagtgttgaccccgttacgctggaaaaccgtcaactgaca
gaaatgccgccgtgctcgcatctgatgagtaactatgatggcacgttaatggtcggggat
ggttgcaacgcccccgtagacgtgaaagatgacgggggctacaagattgaaaacgatcct
ttcctgtatgtgttcaacatgaagactgggaaacatttccaggttgcacaacacaatacg
tcatgggaagtactggaaggcgaccgtcaggtgacgcatccgcatccatcattcacaccg
gacgataaacatattctgtttacgtcggatgttgatggtaaaccggcgctctatctggcc
aaagtgcctgattctgtctggcactaa
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