Dickeya zeae: W909_13690
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Entry
W909_13690 CDS
T03567
Symbol
fadJ
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
dzc
Dickeya zeae
Pathway
dzc00071
Fatty acid degradation
dzc00280
Valine, leucine and isoleucine degradation
dzc00310
Lysine degradation
dzc00362
Benzoate degradation
dzc00380
Tryptophan metabolism
dzc00410
beta-Alanine metabolism
dzc00640
Propanoate metabolism
dzc00650
Butanoate metabolism
dzc00907
Pinene, camphor and geraniol degradation
dzc00930
Caprolactam degradation
dzc01100
Metabolic pathways
dzc01110
Biosynthesis of secondary metabolites
dzc01120
Microbial metabolism in diverse environments
dzc01200
Carbon metabolism
dzc01212
Fatty acid metabolism
Module
dzc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
W909_13690 (fadJ)
00650 Butanoate metabolism
W909_13690 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
W909_13690 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
W909_13690 (fadJ)
00310 Lysine degradation
W909_13690 (fadJ)
00380 Tryptophan metabolism
W909_13690 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
W909_13690 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
W909_13690 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
W909_13690 (fadJ)
00930 Caprolactam degradation
W909_13690 (fadJ)
Enzymes [BR:
dzc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
W909_13690 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
W909_13690 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
W909_13690 (fadJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
YidB
Motif
Other DBs
NCBI-ProteinID:
AJC67071
LinkDB
All DBs
Position
complement(3000219..3002411)
Genome browser
AA seq
730 aa
AA seq
DB search
MTEQLGMDQTDERGTQAAFQLTFRPDHIGVITVDVPGEKVNTLKAEFAEQMQTVLSQARQ
YNGLQGLIILSGKPASFIAGADIGMLDACADVASAQKLAETGQHALDAIAHLPFPVVAAI
HGTCLGGGLELALACDYRLCTADDSTRLGLPEVQLGLLPGAGGTQRLPRLIGVDRALELI
LTGRQLRAAQARRIGLVDEVVAPAVLLEAALGFIRRGKRPVTSPGWRHRLLMLPYVRRWL
FERVRRQTLAKTQGNYPAATRIIEVVRRGLEQGSQVGYQGEARAFGQLVVSPESVALRRL
FFTTTALKKDFGAPVAPGPLRRVGVLGGGLMGGGIASVTALNGQLPVRIKDIQEQGITQA
LHSSWQRLSKQVARRRITPAEQRRQMSLLSGGTDYRGFEHVDVVVEAVFEDIALKQQMVR
DIEAVTPPHTVFATNTSSLPIHQIAAGASRPEQVIGLHYFSPVDKMPLVEVIPHAGTDNS
TLATTVALARKQGKTAIVVADKAGFYVNRILAPYLNEAARCLLEGEPVESIDRALVRFGF
PVGPFTLLDEVGIDVAMKIVPVLVTELGERFCAPAALEAIARDNRKGRKNGRGFYRYDLS
RYERLCNWWRRQHKVSDSRIYRLLDVTPTAHLDPALMTQRCVMMMLNEAVRCLDEGVIRR
PGEGDIGAVMGIGFPPFLGGPFHYMNQLGITTVVGTLRSLQKQYGDRFAPAEGLLRRQSE
QTGFIDDTMS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcagttagggatggaccaaacggatgagcgcggcacccaagccgctttccaa
ctgacatttcgccctgaccacatcggggtgattaccgtggatgtccccggtgaaaaagtg
aacaccctgaaagcggaatttgctgagcagatgcaaaccgtgttgtcacaagcccggcag
tacaacggcctgcaggggctgattatcctgtcaggaaaaccggcgtcgtttattgcgggg
gcggatatcggcatgttggatgcctgtgccgatgtggccagtgcgcagaagctggccgaa
accggccagcacgcgctggatgcgatcgcccatctgccgttcccggtggtggcggctatt
cacggtacctgtctgggtggtggtctggaactggcgctggcgtgcgactatcggctctgt
accgccgatgacagcacccgcctcggattaccggaggtgcaactggggctattaccggga
gcggggggtacccaacgtcttccacgtctgataggcgtggatcgtgcgctggagttaata
ctcaccgggcgacaactgcgcgctgcgcaggcacggcgtatcgggctggttgatgaggtg
gtggcccccgccgtcttgctggaggcggcgctgggttttattcgccggggtaaacgtccg
gtgacctcacctggctggcgacaccggttactgatgctgccgtatgttcgccgttggctg
tttgagcgggtgcggcgacagacgctggcaaaaacgcagggcaactatccggcggcgacg
cgcatcattgaggtggtgcgccgtggtctggagcaggggagtcaggtggggtatcagggc
gaggcccgcgcgttcgggcaactggtggtgtcgccggagtccgtggcattgcggcggttg
ttttttaccaccacggcattgaaaaaagattttggtgcgccggtggctcccggcccatta
cgtcgtgtcggcgtgctgggtggtgggttaatggggggcggtatcgccagtgtgacggca
ctgaacggccagttaccggtaaggattaaggatattcaagagcaggggatcacccaggca
ttacacagtagctggcaacggctaagcaagcaggtggcccgtcggcgtataacaccggca
gaacagcggcgacagatgagcctgctctccggtggcaccgattatcgagggtttgagcat
gttgatgtggtggtggaagcggtatttgaggatatcgcgctcaaacagcagatggtgcgg
gacatcgaggcggtcacgccaccccataccgtgtttgctaccaacacgtcatcgttaccc
atccatcagattgccgcgggggccagccgtccagagcaggtgatcggcctgcactacttt
agcccggtggataagatgccgctggttgaggttatccctcatgccggaaccgataactcg
acgctagccaccacagtggcgttggcgagaaagcagggcaaaacggcgattgttgtggcg
gataaagccgggttttacgtcaatcgtattctggcaccttacctgaatgaagcggcccgc
tgcctgctggaaggggaaccggtcgagtcgattgaccgggcgctggtccgttttggtttt
cctgtcggcccgtttaccttgctggatgaagtggggattgatgtggcgatgaaaattgtg
cccgtgctggtcaccgaactgggagagcgattctgcgcgcctgcggcactggaggcgata
gccagagataaccgcaaagggcgtaagaacggacggggtttttatcgctacgatctgtct
cgctatgagcggttgtgcaactggtggcgtcggcagcataaagtctctgatagccgtatc
tatcgcttgctggatgttacgccaaccgcgcatctggacccggcgttgatgacgcagcgc
tgcgtcatgatgatgcttaatgaagcggtacgctgtctggatgaaggggtgattcgtcgc
ccaggggagggggacatcggcgcagtcatgggcattgggttcccaccgttcctgggggga
ccatttcattatatgaatcaattgggtatcacgacagtggtcggtacgctgcggtcattg
caaaagcagtacggcgatcggtttgcccctgctgaagggctgctccggcggcagtctgaa
cagaccggttttatcgatgacacgatgagttaa
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