Dickeya zeae: W909_14875
Help
Entry
W909_14875 CDS
T03567
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dzc
Dickeya zeae
Pathway
dzc00040
Pentose and glucuronate interconversions
dzc01100
Metabolic pathways
dzc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W909_14875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W909_14875
Enzymes [BR:
dzc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
W909_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF5749
Motif
Other DBs
NCBI-ProteinID:
AJC67290
LinkDB
All DBs
Position
3255071..3256228
Genome browser
AA seq
385 aa
AA seq
DB search
MNNSRVSSAGKKSLLAAIIATAMVTSAAHAADLQTSKATEAASSGWATQNGGTTGGAKAA
SAKIYAVKSISEFKAALNGSDSDPKIIQITGAIDISGGKAYTSFDDQKARSQLSIPSNTT
IIGIGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYETGDGWNAEWDASVIDNSTN
VWVDHVTISDGSFTDDKYTTKNGETYVQHDGALDIKKGSDYVTVSNSRFELHDKTILIGH
SDSNGAQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKAKVYRYLYSFGL
GTSGSILSEGNYFNISNLKSNCDVVKSFNSKVLSDNGSLINGGAAGLNNCSFTTYKPTLP
YKYSVQSMTSSLANSITSSAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctcgtgtgtcttctgcaggaaaaaaaagtttactggcagcgatcattgct
actgcgatggtgacttccgctgctcacgccgcggatttgcaaaccagcaaagcgaccgaa
gccgcatctagcggttgggcgacacaaaatggcggtacgactggtggcgctaaggcggca
tcagccaaaatctatgcagtgaaaagtatcagcgaatttaaagccgcgctgaacggctca
gattccgaccccaaaatcattcagataaccggcgcgattgatatcagcggcggcaaagcc
tacaccagctttgacgaccagaaagcccgcagccagctcagcattccgtccaataccacc
attatcggtatcggcagcaatggtaaattcaccaacggttcgctggttatcaagggcgta
aaaaacgttatcctgcgtaacctgtatatcgaaacgccggtagacgtcgcaccgcattat
gaaactggtgatggctggaacgccgagtgggatgcatccgttatcgataactcaaccaac
gtctgggttgaccatgtcactatcagcgatggcagcttcaccgacgacaaatacaccacc
aaaaatggcgaaacctatgtacagcatgacggtgcactggatatcaagaaaggctctgac
tacgttaccgtttcaaacagccgtttcgaactgcacgacaaaaccattctgatcggccac
agcgacagcaacggcgcacaggactccggcaaactgcgcgttactttccacaacaacgtg
tttgaccgcgtaaccgagcgtactccgcgtgtgcgctttggtagcatccacgcttacaac
aacgtttatctgggcgacgtgaaagctaaggtttaccgctacctgtatagctttggtctg
ggcaccagcggcagcattctgtctgaaggtaactacttcaacatctctaatttgaaatca
aattgtgatgtagtgaaatcgttcaacagcaaagtgctctctgacaatggttcactgatc
aatggtggcgcggccgggttaaacaactgcagctttaccacttacaaacccactctgccg
tacaaatattcggttcaaagcatgacaagcagcctggctaacagcatcaccagcagcgca
ggctacggcaaactgtaa
DBGET
integrated database retrieval system
