Dickeya zeae: W909_15335
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Entry
W909_15335 CDS
T03567
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzc03400
]
W909_15335
DNA repair and recombination proteins [BR:
dzc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W909_15335
Archaeal homologous recombinant proteins
W909_15335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
AAA_21
FapA
TsaE
nSTAND3
NTPase_1
AAA_19
GTP_EFTU
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AJC67366
LinkDB
All DBs
Position
3345332..3349015
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFVSNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVSPSHNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLTMIADLTGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISERVFEKHKEAQSQLETLRAKVATLELLSDEQRQALEQQLEAIRQQEQSLSIHREE
VLAHQRWYDTLLQLQQAQQHAQQQHAAQQQLQQQSQPQLDKLERGEPAEKLRPRFDERGR
AQREKQRLSQQLTNVRQQISRQQEALNQLKTQLEKALSARQQHADYRQQQETLINERILP
LDHHIATLQTQRNQQQQASDNLVEQQKMLITTLARLQRQQEQTRQRLEDIDTYRQQHSRH
QYLGSHIPLWQAQFPQQQKWQQDLHVVQEKAAQQQIQAEYLDQQRASLVEKQQAQQNASE
RAQQLLNDHLKQDEQMEAEHPLAGLRQQLARRMAERPERQQLATSAAVLQRLISQRTLLE
AQQLETLQRIQTLEELQVQQRRDYQNQASHLADLDKRHELELHIVSLEKERQQLQPGKEC
PLCGSTHHPAVELYQALRPSETQIRLHALRQEVETLKANVVQTETQLQLQKQHRQQQQNA
LESVQRDYESLRQQCQSVSERLLVSFDPLQLPTLHQWIESCDAQEQSLQAQIASRERNQR
HIQESKDLLTSAQQLLAQTVQQLALNSQQQEALQASRDELRLLLDKTERELARLHDSLSQ
TMETFGLTAPTLAQQEEWLRQRQTEWLRWQENEHEQNQCRPQLAALEAEIIASQRRLEET
ENAIKTGQLQLTETQRTLEQAQQQRWQLMGNQAVNDVLKQLRQVSQTLEQEGLQAQQQWQ
QGQSLQSRLGGEIDSLEQQSQHADTALQQLQAQFAEELAAAGFDDETAFRQALLDEAERQ
QLVTLKERLNQRQQQVDALLQQANSALEHHQASRPESMPEGINDWDIRQLLSGLGDMVKV
EAERQGELRQQLVSDQQRRDKQRQLLEAIERGQHVCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLHRKASDTLELQVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSAKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKTIGVISHVEAMK
ERIQVQIRVKKRNGLGISQLDSVYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactcattgcagggcgagtggaaaatc
gacttcacgcgcgagccgtttgtcagcaatagccttttcgccatcaccgggccgaccggt
gccgggaaaaccaccttgctggacgccatctgtctggcgctctaccaccagacaccacgc
ctgaaagtcagccccagccataacgaattgatgacccgccacacggcagaatgcctggct
gaggtggagttcgaggtaaaaaatgtcgcttaccgtgcgttctggagccagcgtcgcgcc
cacaacagcccggaaggcaatctacagcctcccaaggttgagctggcactgtgcgccgac
ggcaagatcctgaccgataaagtgaatgacaagctgacgatgatagccgacctcaccggg
ctggatttcgatcgtttcaccaagtcgatgatgttatctcaggggcagttcgccgcgttc
ctcaacgccgatgccaatcaacgggcagaattactcgaagagctgaccggcaccgatatt
tatggacagatctccgaacgcgtctttgagaaacacaaagaagcccaaagccagttggaa
accttacgggcgaaggtcgccacgctggaattattgagcgacgagcaacgccaggcgctg
gaacagcaactggaggccatccgccaacaggagcaatccctatcgatacaccgggaagag
gtcctggcgcatcaacgctggtacgacacgctgctacagctccagcaggcacaacagcac
gcgcaacaacagcatgcggcacagcaacaattacagcaacagtcacaaccgcaactggat
aaactggaacgtggcgaaccggcggaaaaactacgcccccgcttcgacgagcgtgggcgg
gcgcaacgggaaaaacagcggctgagccaacagttgacgaatgtgcgccagcaaatcagc
cgccagcaggaagcgctgaaccaactgaaaacacagttggaaaaagcgctgtctgcacgc
cagcaacatgcggactaccgccagcaacaagaaaccctgatcaacgagcgaattctgccg
cttgatcatcacatcgccaccctgcagacacagcgcaaccagcaacagcaagcgtcagat
aatctggttgaacagcaaaaaatgctgataaccacgctggcccgattgcagcgccagcaa
gaacaaacacggcaacggctggaagatattgatacctatcgccagcagcatagccgccac
cagtatctgggcagccatattccactgtggcaggcgcaattcccgcaacagcagaaatgg
cagcaggacctgcacgtcgtgcaggaaaaggcggcgcagcagcagattcaggcggaatac
cttgaccagcagcgcgcttcgctggttgagaaacagcaggcgcagcaaaatgccagtgag
cgcgcccaacaactgctgaatgaccatctgaagcaggatgaacagatggaagcggaacac
ccgctggcaggcttgcgtcagcagttggcacgacgcatggcggaacgtccggagcgtcag
caactggctaccagcgcagcggtgctgcaacggttgattagccagcgcaccctactggaa
gcgcaacagctagagacgctgcaacggattcaaacgctggaagaactgcaagtgcagcaa
cgtcgggattatcaaaatcaggccagccatctggcggatctcgataaacgtcacgagctg
gaactgcacatcgtcagcctggaaaaagaacgccagcaattgcagccgggcaaagaatgt
ccgctgtgcggttcaacgcatcacccggcggtggagctttatcaggcgttgcgcccctca
gaaacccagattcgattgcacgcgctgcgtcaggaagtcgagacgctgaaagccaacgtc
gtgcaaaccgaaacccagcttcagttgcaaaaacagcaccgccaacagcaacaaaacgct
cttgaaagcgtccagcgtgattacgagtcactgcggcaacagtgccagtcggtgagtgag
cgtttactggtgagcttcgatccacttcaattgccgacgctacaccagtggattgaatcc
tgcgatgctcaagaacagtcgctgcaggcgcaaattgccagtcgtgagcgcaaccaacgt
cacattcaggaaagtaaggatttactcacgtctgcccagcaactgctggcgcaaaccgta
caacagctggcgctgaacagccagcagcaggaggcgttgcaagcatcacgggatgaattg
cggttattactggataaaaccgaacgtgaactggctcggctgcacgacagcctgagccaa
acgatggaaaccttcgggctgaccgcgccgacactggcacagcaggaagagtggttacgc
cagcgccagacagaatggttacgctggcaggaaaacgagcacgaacagaatcagtgccgc
ccacaactggccgcgctggaagcggaaatcatcgccagccagcggcgactggaagagacc
gagaacgccatcaaaaccggccagttgcagttgacagaaacccaacgcacgctggaacag
gcacagcaacaacgctggcaattgatgggcaatcaggcggtcaacgacgtgctcaagcaa
ttgcggcaggtcagccagacactggagcaggaaggcctgcaagcgcagcagcagtggcaa
caaggccagtcactgcaaagccgtcttggcggggaaatcgacagtctggaacaacaaagc
cagcatgccgatacggcgttacaacagcttcaggcccagtttgccgaagaactggccgcc
gccgggttcgatgacgaaaccgcgtttcgtcaggccttgctggatgaggctgaacgccag
cagctcgtcaccttaaaagagcgtcttaaccagcgccagcaacaggtcgatgccttgcta
caacaggcgaatagcgcgctggaacaccaccaggcgtcgcgaccggaatccatgccggaa
ggcatcaacgactgggatatccgccagttactttccggactcggcgatatggtaaaagtc
gaagccgaacgacaaggcgagttacgccagcaactggtcagcgaccagcaacgccgcgat
aagcaacgtcagttacttgaagctatcgaacgtggtcagcacgtgtgtgatgactggggc
tatctcaatcagttaatcggttcgcaaaaaggcgataaattccgccgtttcgcacaagga
ttgacgctggatcacctggtgttcctggccaaccgtcagctctcgcggctgcatgggcgc
tacctgttgcaccgcaaagcgtctgacacgctggagttgcaggtagtcgatacctggcag
gctgacgcggtacgcgacacccgaaccctgtccggcggcgaaagttttctggtcagcctg
gcgctggcgctggcgttatccgacctggtgagcgcgaaaacccgtatcgattcgctgttt
cttgatgaagggttcggcacactggatggcgaaacgctggataccgcgctggacgtgttg
gacaacctcaatgcttccggcaaaaccatcggcgttatcagccatgtggaagcgatgaaa
gagcgcatacaggtgcagattcgggtcaaaaagcgcaacggcctcggcatcagccagctc
gacagcgtctacgcagtaaaatga
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