Dickeya zeae: W909_15850
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Entry
W909_15850 CDS
T03567
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzc03021
]
W909_15850
Transcription machinery [BR:
dzc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
W909_15850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJC67458
LinkDB
All DBs
Position
complement(3456559..3457551)
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AA seq
330 aa
AA seq
DB search
MSQNTLKVNELHEDAEFDENGVDVFDDKALAEEETSDSDLLDEELLSQGTAQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVSSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAERLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLDIEELFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttgcatgaagatgctgaatttgatgagaac
ggagtcgatgtttttgacgacaaagcgcttgcggaggaagaaaccagcgatagcgatcta
ctcgatgaggaattgctctcgcaaggaactgcacagcgcgtgctggacgcaactcagctc
tatctgggagaaatcggctactcacctcttctgacggctgaggaagaagtttattttgcc
cgtcgggcattacgcggcgatgtctcttctcgccgccgtatgatcgagagtaacctgcgg
ctggtggtgaaaatcgcccgccgctacaacaatcgaggcctggcattgctggacttgatt
gaagagggaaacctcggtcttatccgcgctgttgagaaatttgaccctgaacgcgggttc
cgtttttcaacttacgccacctggtggatccgtcaaacgattgaacgggccatcatgaat
caaacccgaactatccgtttacctatccatatcgtcaaagaactcaacgtttatctgcgt
actgctcgtgagctttcccacaagttggatcatgagccgagcgcagaagagattgctgaa
cgcctggataagcctgtggacgacgtaaaccgcatgctgcgcctcaatgagcgcatcacg
tcggtcgatactccattgggcggggattcggaaaaagcgctgctggatattctggccgat
gagaaagataacggcccggaagataccactcaggataacgatatgaagcagaatatcgtt
aagtggttgtttgaactgaacgccaagcagcgtgaggtgctggctcgtcgtttcggtctg
ctgggatacgaagctgccacactggaagatgtcggtcgtgaaatcggtctgacacgtgaa
cgggttcgtcagattcaggtagaagggttgcgccgtctgcgtgaaatcctgcaggtgcag
ggtctggacatcgaagagttgttccgcgaataa
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