Dickeya zeae: W909_17195
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Entry
W909_17195 CDS
T03567
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dzc
Dickeya zeae
Pathway
dzc00220
Arginine biosynthesis
dzc00240
Pyrimidine metabolism
dzc00250
Alanine, aspartate and glutamate metabolism
dzc01100
Metabolic pathways
dzc01110
Biosynthesis of secondary metabolites
dzc01240
Biosynthesis of cofactors
Module
dzc_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
W909_17195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
W909_17195 (carB)
00220 Arginine biosynthesis
W909_17195 (carB)
Enzymes [BR:
dzc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
W909_17195 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AJC67714
LinkDB
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Position
complement(3773033..3776257)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLETARSGIAHNMDEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENLDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGADRIWYLADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQG
ANGLTKEFLRLLKRKGFADARLAKLAGVSEGEIRKLRYKYDLHPVYKRVDTCAAEFATDT
AYMYSTYDEECEANPNQDRDKVMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARQLEAAGVP
VIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVSTIDQAVEKAVNIGYPLVVRPSYVL
GGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELAVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLAQQGVTKEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSNSSMKKTGRALLSVREGDKARVVDL
AAKLLKHGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTMNGGFATAMSLNADPTEQVISVQEMHARIQG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagtatcctgattctcggtgccggtccgatcgtgatc
ggtcaggcgtgcgagtttgactactccggcgctcaggcgtgtaaggcgctgcgtgaagaa
ggctaccgcgtgattctggtgaactccaacccggccacgattatgaccgacccggagatg
gccgacgccacctacattgaaccgattcactgggaagtggtgcgcaaaatcatcgaaaaa
gaacgtccggatgccgtattgccgacgatgggcggtcagacggcgctgaactgcgcgctg
gaactggaacgtcagggggtgctggcagagttcggcgttaccatgattggtgcgaccgct
gatgccatcgataaggcggaagatcgtcgccgtttcgatatcgcgatgaaaaaaatcggc
cttgaaaccgcacgttccggcattgcccacaatatggacgaagcgctggcagtcgcggcg
gatgtggggtatccctgcatcattcgcccgtctttcaccatgggtggcacgggcggtggt
attgcttataaccgtgaagagttcgaagaaatttgtacccgtggtctggatttgtcaccg
accaaggaactgttgatcgacgaatcgttgatcggctggaaagagtatgaaatggaagtg
gtgcgggataaaaacgataactgcatcatcgtctgctctatcgaaaacctcgatgcgatg
gggatccacaccggtgactccatcactgtcgcaccggcacaaaccctgaccgacaaggaa
taccaaatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggggtagaaaccggc
ggctccaacgtgcagtttgcggtcaacccgaaaaccgggcgtctgatcgttattgaaatg
aacccgcgtgtatcccgctcctcggcgctggcttctaaagcgaccggtttcccgatcgcc
aagatcgccgccaaactggctgtgggttatacgctcgatgaactgatgaacgacattacc
ggcgggcgtaccccggcatcgttcgaaccgtccatcgattatgtggttaccaagatcccg
cgctttaacttcgaaaagttcgctggtgctaacgatcgtctgacgacgcagatgaaatcg
gtgggtgaagtgatggcgatcggccgtacccagcaggagtcgctgcagaaagcgctgcgt
ggtctggaagtcggggcgaccggtttcgatcctaaagtgagtctggacgatccggaggca
ctgactaaaatccgccgcgaattgaaagacgccggtgccgatcgtatctggtatctggcg
gacgcattccgtgcaggtatgtcggttgacggcgtattcaacctgaccaacattgaccgc
tggttcctggtgcaaatcgaagaactggtgcgtctggaagagcaggtggcagaacaaggc
gctaacggcctgacgaaagaattcctgcgcttgctcaaacgcaaaggctttgccgatgcc
cgtctggcaaaactggccggtgtatcagaaggtgaaatccgcaagctgcgttacaaatat
gatctgcacccggtctacaagcgtgtagatacctgtgccgctgagttcgccaccgatacc
gcctacatgtactccacgtatgacgaggagtgcgaggccaacccgaatcaggatcgtgac
aaggtaatggtactgggcggtggcccgaaccgtatcggtcaggggattgagttcgactat
tgctgtgtacatgcggcgctggcgctgcgtgaagacggctatgaaaccattatggtcaac
tgtaacccggaaaccgtctctactgactacgatacgtccgatcgcctctacttcgagccg
gtaacgctggaagacgtgctggagatcgtgcgtattgagcagcctaagggcgttatcgtg
cagtacggcggacagacaccgttgaaactggcgcgtcagcttgaggccgcgggtgtgccg
gtgatcggcaccagcccggatgccatcgaccgtgcggaagaccgtgagcgcttccaacag
gcggtcaaccgccttggtctgaagcaaccggccaacgccacggtcagcaccatcgaccag
gcggtggaaaaagccgttaacatcggctatccgctggtggttcgcccgtcttacgtgctg
ggcggccgggcgatggaaatcgtgtatgacgaaatcgacttgcgtcgttacttccagacg
gcggtcagtgtttccaacgatgcgccggtgctgctggaccgtttcctggatgacgcggtg
gaagtggatgtggacgctatctgcgacggtgagcgcgtcttgattggcggcatcatggaa
catatcgaacaggcgggtgtgcactccggtgactcggcctgttcgctgccagcttatacc
ctgagcaaagagattcaggatgtgatgcgccagcaggtggaaaaactggcgttcgagctt
gcggtgcgtggcctgatgaatgtgcagttcgcggtgaaaaacaacgaagtgtacctgatt
gaggtgaacccgcgtgcggcgcgtaccgtgccgtttgtttccaaagccacaggggttccg
ctggcgaaagtggcagcgcgtgtgatggttgggcaaacgctggcgcagcagggcgtcacc
aaagaggtgatcccgccgtactattccgttaaggaagtggtgctgccgtttaataaattc
cccggtgtggacccgatcctcgggccggaaatgcgttctaccggtgaagtgatgggggta
ggtcgtacctttgctgaagcctttgccaaggcgatgctgggcagtaactcatcgatgaag
aaaactggccgcgcgttgctgtcggtacgtgagggtgacaaggcccgcgtggtggatttg
gcggccaagctgctcaagcacggttttgaactggatgcgactcacggcactgcggtggtg
ttgggtgaggccggtatcaatccgcgtctggtgaacaaggtgcatgaaggccgtccacat
attcaggaccgcatcaagaatggcgagtatacctatatcgtcaataccacggcaggtcgt
caggcaatcgaagattccaaactgattcgccgcagtgcgctgcagtataaagtgcattac
gacaccaccatgaatggcggttttgctacagcgatgtcgctgaatgctgacccaaccgag
caggtcatttccgttcaggaaatgcatgcccgtattcagggataa
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