Dickeya zeae: W909_17385
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Entry
W909_17385 CDS
T03567
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dzc01011
]
W909_17385
Enzymes [BR:
dzc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
W909_17385
Peptidoglycan biosynthesis and degradation proteins [BR:
dzc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
W909_17385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
AJC67749
LinkDB
All DBs
Position
complement(3819421..3821352)
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AA seq
643 aa
AA seq
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MFKIGYWRSVAAVLCLFGVSYQVLADSLDEQRQRYQQVKSAWDNNQMDVVSQLMPTLRDY
PLYPYLEYRALTQDLSTVSTVQVRQFMTSHPTLPAVRTLNNSFINELARRQDWSGLLAFS
PQPPKPVASLCNYLYAKVMTGQAQGVWEQTQEIWLTGRSLPPTCDKLFSAWQQQGGLTSM
MVLERMRLAMDAGSAGLVNHLARQLPADYKTITDALLKLQSNTKSIERFARSVGPTDFTR
RAVLSTFSRIARQDPNEALALLPQLVRLQKMRPQERQSMEDDVAWRLMSSDATDEQARWR
DAVILRSASAPLLERRVRMALGQGDRVGLAQWMARLPAEVQQKDEWRYWRAVLLLEQGQK
QEGENQLRELMRTRGFYPMAAAQKLNVNYPLTIMIAAKPERSIGQSPEVARVRELMFWGL
ESLARSEWAGLVASRERPQQEALARFALEQRWYDLSVQATIVAKLWDNLEERFPLAWSDD
FRQAIQGKGISQSYAMAIARQESAWNPQARSAVGAAGLMQLMPATAQHTAEMFNIASYSN
SSQLLDPQMNIQLGTSYLEYVYQSFGQNRILASAAYNAGPSRVNNWLKDTNGRIDAIAFV
ESIPFSETRGYVKNVLAYDVFYRSLMQQRQTALLMDNEWQRRY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatagggtattggcgatctgtggccgccgtgctgtgtctctttggggtttcg
taccaggtgctggcagactcgctcgatgagcagcggcagcgctatcagcaagtaaagtcc
gcctgggataataatcagatggacgttgtttcccaattgatgccgacgctgcgtgattac
ccgctttatccctatctggaatatcgcgccctgactcaggatctctcaacggtgagcacc
gtgcaggtcaggcagtttatgacgtcacacccaacactgcccgcggtacggacgttgaat
aacagttttatcaatgagcttgcccgccgtcaggactggagcggcttgttggcattcagc
ccccaaccgcctaaacccgttgcttcgctctgcaactatttgtatgccaaggtgatgacg
gggcaggcgcagggtgtctgggagcagacacaagagatctggctgaccggccgttctctg
cctccgacctgtgacaagctgttttccgcctggcagcaacaaggcggtttaacttcaatg
atggtgcttgagcggatgcggttggccatggatgcgggcagtgcggggttggtcaaccat
cttgcccggcaactaccggcagattacaaaaccatcaccgatgcgttgctgaagttacaa
agcaacacgaaatcgattgaacgattcgcccgctctgtcggcccaacggattttactcgc
agggccgtgttgtcgacatttagccgtattgcccgtcaggatcccaatgaggcgctggcc
ctattaccgcagttagtacggctgcaaaaaatgcgtccgcaggaacgccagagcatggaa
gatgacgtggcctggcggctgatgagcagcgatgctaccgacgaacaggcacgctggcgt
gatgcggtgattttgcgtagtgcctcggctcccttgctggagcgacgtgtccgtatggcg
ttggggcaaggtgatcgtgtcggtctggcacagtggatggcgcgtttgccagccgaggtg
cagcaaaaagacgagtggcgttactggcgagcagtactgttgcttgaacaagggcaaaag
caagagggggagaatcaactgcgcgagctgatgaggacccgcggtttttacccgatggct
gctgcacagaaactgaatgttaactatccgctgacgatcatgattgccgccaaaccggag
cgttcgattgggcagtcaccggaggtggcaagagtacgtgagctgatgttctggggactg
gaaagtctggcccgttcagagtgggctggtctggtcgccagccgggaaagacctcagcag
gaggcgctggcacgttttgcattagaacaacgttggtatgatttgagtgtgcaggccacg
atagtggcgaaactgtgggataacctggaagagcgtttccctctggcatggagtgacgat
ttccgtcaggcgatacaaggtaaaggaattagccagagttatgccatggcgatcgctcgt
caggaaagcgcctggaatccacaggcgcgttctgctgtaggtgccgcgggtttgatgcaa
ctgatgccagctaccgcgcagcacaccgccgagatgtttaacatcgccagttatagcaat
agcagtcagttgctcgatccgcagatgaatattcagcttggtaccagttacctggaatat
gtctatcagtcgtttggtcagaaccggattctggcatcggcggcttataatgcggggccg
tcgcgggtcaataactggttgaaagacacaaatggccgtattgatgcgatcgcgttcgtg
gaaagcattccattttcagaaacccgtgggtacgttaaaaacgtgctggcgtatgacgtt
ttttatcgcagtttgatgcaacaacgccagacggctttgttgatggataatgagtggcag
cgacgttactga
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