Dickeya zeae: W909_18825
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Entry
W909_18825 CDS
T03567
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dzc
Dickeya zeae
Pathway
dzc03420
Nucleotide excision repair
dzc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W909_18825 (uvrD)
03430 Mismatch repair
W909_18825 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzc03400
]
W909_18825 (uvrD)
Enzymes [BR:
dzc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W909_18825 (uvrD)
DNA repair and recombination proteins [BR:
dzc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W909_18825 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
W909_18825 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AJC68022
LinkDB
All DBs
Position
complement(4186684..4188846)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIDQLLGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQHFLRDFNDVATIRLEQNYRSTANILNAANALIAHN
GDRLGKNLWTDGIEGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMTNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTTDLPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQAKVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPPECVEEVRLRASVSRPVNHQRLG
TPISQSDTGYKLGQRVRHAKFGEGTIVNVEGSGEHCRIQVAFVGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagtctgaatgataaacagcgtgacgccgtggcggcg
ccgcgcagcaatatgctggtactggctggcgcaggcagtggcaaaacccgcgtactggtg
caccgtatcgcctggttgctgacggtggagaactgctcgccgtattcgatcatggcggtg
acctttaccaacaaggcggcggcggaaatgcgccaccgtatcgatcagctgctcggcacc
agccaggggggaatgtggatcggtactttccacggtttggcacatcgcttactgcgggcg
caccatctggatgccgggttaccgcaggatttccagattctggacagcgaagatcaactg
cggttgctcaagcgactgattaaagcgttgaatctggacgagaaacaatggccaccccgt
caggcgatgtggtacatcaacggcaaaaaagacgaaggcttacggccacagcatatcgat
agctacggcaatccggtggaacagacctggttgcgcatctatcaggcttatcaggaagcc
tgtgatcgcgcagggctggtggatttcgccgaactgctgctgcgtgcccatgaattgtgg
ctcaacaaaccgcatattcttcagcattatcgcgatcgctttaacaacattctggtggat
gagtttcaggataccaaccgcatccagtatgcctggatccgcctgttggctggcgatagc
gccaaagtgatgatcgttggcgacgacgaccagtcaatctacggctggcgtggggcgcag
gtggagaacatccagcatttcctgcgtgacttcaacgacgtggcgaccatccgtctggag
cagaattaccgttccaccgccaatattcttaacgctgccaacgcgttgattgcccacaac
ggcgatcgactgggtaaaaacctgtggaccgacggtattgaaggcgagccgatttcgctc
tactgcgcctttaacgaactggatgaagcacggtttgtggtcagccgcatcaaggtgtgg
caggaagcgggtggtgcgctcagcgaatgcgctattttgtatcgcagcaacgcccaatcc
cgtgtactggaggaagcgttgttgcagcaaagcctgccgtaccggatttatggcggtatg
cgcttcttcgaacgacaggaaatcaaagacgcgttgtcttatttgcgcttgatgaccaac
cgcaacgatgacgccgcttttgagcgtgtggtcaacaccccgacgcgcggtatcggcgat
cgcaccctggatgtggtgcgccagaccgcccgcgaccgtcagttgacgctgtggcaggcc
acgcgtgcgttgttacaggaaaaggtgctggccgggcgtgcggcggcagcattacagcgt
tttctggaactggtggatgcgcttgccagcgataccactgacttacccttgcatgtgcag
accgaccgggtgattcgcgattccggcttgtggagcatgtacgagcaggagaaaggcgaa
aaaggccaggcgaaggtagagaacctggaagaactggtgacggcgacccggcaattcagc
tatcaggatgaagatcaggacttgctgccactacaggcgtttttgtctcacgcggcgctg
gaagcgggcgaggggcaggcggatgcctatcaggacgcggtacaattgatgacattgcac
tctgccaaagggctggagttcccgcaggtgttcgtcgtcggtatggaagaggggatgttc
cccagccagatgtcgctggacgaaggcggtcgtctggaagaagagcgtcggctggcgtat
gtcggcgtgacgcgggccatgcagaaactgacgctgacttacgccgaaagccgccggtta
tacggtaaggagacctaccaccgtccgtcacgctttattggcgagttgccgcctgaatgt
gtggaagaggtgcggctgcgcgccagtgtctcgcgcccggtcaatcatcagcgcctgggg
acgccaatcagccagagcgacaccggctataagctggggcagcgggtgcgccacgccaag
ttcggcgaaggcaccattgttaacgtagaaggcagtggtgaacattgccgtatccaggtc
gcttttgtgggtcagggtatcaagtggctggtggcggcttatgcccgtctggaggcggta
tag
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