Dickeya zeae: W909_18845
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Entry
W909_18845 CDS
T03567
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dzc
Dickeya zeae
Pathway
dzc00300
Lysine biosynthesis
dzc00470
D-Amino acid metabolism
dzc01100
Metabolic pathways
dzc01110
Biosynthesis of secondary metabolites
dzc01120
Microbial metabolism in diverse environments
dzc01230
Biosynthesis of amino acids
Module
dzc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
W909_18845 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W909_18845 (dapF)
Enzymes [BR:
dzc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
W909_18845 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AJC68026
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Position
complement(4191252..4192076)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPDLIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTSKREINVSTHNGRMVLSVTEDELVRVNMGE
PNFEPQQVPFRATKPEKTYILRAAEHTVLCGVVSMGNPHCVLQVDNVDTAPVEEQGPLLE
NHERFPERANVGFMQVVNPHLIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAADVKV
QLPGGELDIHWDGPGHPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggatctgatccgtcgtttatcggatcggcattgcggagtg
gggttcgatcaactattgatcgtcgaaccgccttacgatcctgagctggattttcactat
cgcatcttcaacgccgatggcagtgaagtggcgcagtgcggtaatggcgcgcgctgtttt
gcacgttttgtccgcctgaaagggttgaccagtaaacgtgagatcaacgtcagtacgcat
aacggtcgcatggtactgtcggtgacggaagatgaactggtgcgggtcaatatgggcgag
cccaactttgaaccgcaacaggtgccgtttcgggcgaccaagccggaaaaaacctatatt
ttgcgcgccgctgaacacacggtgttgtgcggtgtggtgtcgatgggtaatccgcattgc
gtacttcaggtggataatgtggataccgcgccggtagaggaacaaggcccgttgctggaa
aaccatgagcgttttcctgagcgcgccaatgtcggctttatgcaggtggtcaatccccat
cttatccggttgcgtgtctttgagcgcggtgcgggggaaacgcaagcctgcggtagcggt
gcctgtgccgccgtggcggtcggcatccaacaggggctgctggcagcggatgtcaaagtc
cagctgcctggcggtgaactggacattcactgggacggccccggtcatccgttgtttatg
accggcccggcaacccatgtttatgatggatttattcatctatga
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