Dickeya zeae: W909_20195
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Entry
W909_20195 CDS
T03567
Name
(GenBank) pectate disaccharide-lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
dzc
Dickeya zeae
Pathway
dzc00040
Pentose and glucuronate interconversions
dzc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W909_20195
Enzymes [BR:
dzc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
W909_20195
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Beta_helix
DUF7664
Motif
Other DBs
NCBI-ProteinID:
AJC68275
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Position
complement(4493167..4495371)
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AA seq
734 aa
AA seq
DB search
MKYATSGLLSVALNSLLLLGSHTAFATTQDTAPVWHSIAFGQSTDVNFATNVLPGKVGVN
DVIINGKKLTVNDKASLASPVTIESRGGKIANTHDGLTFFYTQLPANVNFTLQSDVTVDQ
FGPENDAKPNAQEGAGLLVRDILGVPRQEPLKEGYEEFPAASNMVMNAIMTQDKKSKTDV
KMQLISRDGVTQPWGNTNAEITRTSYQEKINLEQTPTFRLKLERTNDGFITAYAPKGSDQ
WVSKTIKGADLVTQQDKSHYYVGFFASRNAKITISNASLTTSPANTIPSAPFKAETTAPL
LQVASSSLSTSDTYPVQARVNYNGTIEVFQNGKSLGKPQHVRAGDYFSLTTRLTQPKSEF
KLVYMPEEGEDKTAKDTSFSVEKITLADAKNLYVSPEGNAGNNGSKNAPLDIKTAINALP
AGGTVWLMDGDYSATVIPVSASGNARGIKTLMPADKKAVFHGLQLNASYWKIKGIEITGK
SFRIEGSHNQIERVLAHHCDNTGIQVSSSDNVGRPLWASYNLILNSESHSNQDPSKKDAD
GFAIKMRVGEGNVIRGAFSHDNVDDGFDLFNKIEDGPNGAVLIENSVSLNNTSNGFKLGG
EGQPVAHQVKNSIAIGNHMDGFSDNFNPGALQVTNNIALDNVRFNFIFRPSPYYGPEKQG
IFKNNISLRTRPGKYDDAVVGRVDASNYFIKNNHSLNSEGKEITTANYKSVAIPAVFSRD
EKGNLQLGDFLKKK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctacttcggggttactctctgtcgcccttaattcgcttttgcttctgggt
tcccacaccgcctttgccaccactcaggataccgcaccagtgtggcacagcatcgcgttt
ggtcagtctaccgatgtgaacttcgccaccaacgtattgccgggaaaagtcggcgttaac
gacgttattatcaacggtaaaaagctgactgttaatgataaagccagtctggcttctccg
gttactatcgaaagtcggggaggaaaaatcgccaacacccatgacggcctgacctttttc
tatacccaattgcctgccaatgtgaatttcacattgcaatctgacgtcaccgtcgatcag
ttcgggccggaaaacgacgccaaacccaatgcccaggaaggggccggtctgttagttcgc
gatatccttggcgtcccccggcaggaaccattgaaagaagggtatgaagagtttccagcg
gcgtcgaacatggtgatgaacgccatcatgacgcaggacaaaaaatcgaaaaccgatgtg
aaaatgcagctcattagccgcgatggcgtgacacaaccctggggtaataccaacgcagaa
attacccgtaccagttatcaggaaaaaattaacctggagcagaccccgacatttcgtctg
aaactggaacgcaccaacgatggcttcatcaccgcttatgcacccaaaggcagcgaccag
tgggtcagtaaaaccataaaaggggcggatctcgttactcaacaagacaaaagccactac
tatgtgggattcttcgcctcccgtaatgcgaaaataaccatcagtaacgccagtctgacc
accagtccagccaacacgataccttccgcgccattcaaagctgaaaccactgctccactg
ctgcaagtagcatcgtcttcgctttccaccagcgacacctatccggtacaggcgcgggtg
aattacaacggaacgattgaagtattccaaaacggcaaatcgttgggtaaaccgcagcat
gttcgcgccggagattatttttctctgacaaccaggctgacgcagccaaaatcagagttc
aaactggtctacatgcctgaagaaggtgaagacaaaaccgcaaaagacacctcattcagc
gtagaaaaaattacgctggccgacgccaaaaatctgtatgtctccccggaaggtaacgct
ggcaacaacggcagcaaaaacgcaccattggatattaaaacagccattaatgcgttacct
gctggcggcacagtatggctgatggatggcgattacagcgcgaccgttatcccggtcagt
gccagcggtaacgccagaggcattaaaacgctgatgccagcagacaaaaaagcggttttc
cacggcctgcaactcaacgccagctactggaaaatcaaagggattgaaatcaccgggaag
agtttccgcattgaaggcagccacaaccagattgaacgggtactggcacaccactgcgat
aataccggtattcaggtttcatccagcgataacgtgggtcgtccgttatgggccagttat
aacctgatcctgaattcagaatcccacagtaatcaggacccgagtaaaaaagacgccgat
ggtttcgcaataaaaatgcgggttggcgagggtaacgtcattcgcggtgccttctcccat
gataacgttgatgacggtttcgacctgttcaacaaaattgaggatggcccgaatggcgcg
gtgttgatcgagaactccgtctcgctcaacaataccagcaatggcttcaagctgggtggt
gaaggccagcctgtcgcgcatcaggtgaaaaatagcatagctatcggtaaccacatggac
gggtttagcgacaacttcaaccccggcgcactacaggtcaccaacaatatcgcgctggat
aacgtgcgctttaactttatcttccggccaagcccttactatggcccggaaaaacaaggt
attttcaaaaacaatatctcactgcgcacccgcccaggcaaatatgatgacgccgtcgtc
ggcagggtagatgccagcaactatttcatcaaaaataaccattcgctcaacagcgaagga
aaagagatcacgacggcgaattataaatctgtcgcgataccggcggtattcagccgtgat
gaaaaaggcaatttgcagttgggtgattttctgaaaaagaaataa
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