Dickeya chrysanthemi: Dd1591_0157
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Entry
Dd1591_0157 CDS
T00930
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dze
Dickeya chrysanthemi
Pathway
dze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd1591_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dze03021
]
Dd1591_0157
03019 Messenger RNA biogenesis [BR:
dze03019
]
Dd1591_0157
Transcription machinery [BR:
dze03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dd1591_0157
Messenger RNA biogenesis [BR:
dze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dd1591_0157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ACT05050
UniProt:
C6CGH9
LinkDB
All DBs
Position
193133..194392
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGETDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtgtctgagttaattactcttggcgaaaat
atggggctggagaatctggctcgcatgcgtaaacaggatattattttcgctatcctcaag
cagcacgcgaaaagtggtgaagacatctttggcgatggcgtactggaaatattgcaggat
ggttttggtttcctccgctccgcagacagctcctacctcgccggccctgatgatatctac
gtttcccccagccaaatccgacgcttcaacctccgcactggcgacaccatttccggtaag
attcgtcctccgaaagaaggtgaacgctatttcgcgctgttgaaggttaacgaagttaac
tatgacaaaccggaaaatgcccgcagcaaaatcctgtttgaaaacctgacgccgctgcac
gccaattcgcgtctgcgtatggagcgcggtaacggttctaccgaagacctgaccgctcgc
gtactggatctggcctcgccgatcggtcgtgggcagcgtggcttgatcgtcgcgccgccg
aaagccggtaaaaccatgctgctgcaaaacatcgctcagagcatcgcttacaaccatcct
gattgcgtgctgatggtgctgctgattgatgaacgtcctgaagaagtgacggaaatgcag
cgcttggtgaaaggggaagtggttgcgtcaaccttcgacgaacccgcctctcgccatgtt
caggttgccgaaatggtgatcgagaaagccaagcgcttggttgagcacaaaaaagacgtg
attattctgttggactcgataacccgtctggcccgtgcttacaacaccgtggtgccggca
tccggcaaagtgctgactggtggtgtcgacgcgaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcccgtaacgttgaggaaggcggcagcctgacgatcatcgctaccgcgctg
atcgataccggttcgaagatggacgaagtgatttacgaagagttcaaaggcaccggtaac
atggaattgcacctgtctcgtaagattgctgaaaaacgcgtgttcccggccatcgactac
aaccgctccggtactcgtaaggaagagctgttgaccacgtccgaagagctgcagaaaatg
tggattctgcgcaagattatccatccgatgggtgaaaccgatgcgatggagttcctgatc
aacaaactggcgatgaccaaaaccaacgacgaattcttcgatatgatgaaacgttcgtaa
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