Dickeya chrysanthemi: Dd1591_0271
Help
Entry
Dd1591_0271 CDS
T00930
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze00040
Pentose and glucuronate interconversions
dze01100
Metabolic pathways
dze02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd1591_0271
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd1591_0271
Enzymes [BR:
dze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd1591_0271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACT05163
UniProt:
C6CH51
LinkDB
All DBs
Position
complement(325913..327040)
Genome browser
AA seq
375 aa
AA seq
DB search
MKSLITPITAGLLLALSQPLLAATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARL
DANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG
SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGT
PDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNAR
LPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVL
KGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAYNYSPVSAQCVKDKLPGYA
GVGKNLATLTSAACK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactcattaccccgattaccgctggactgttactggcgctcagccaacctttg
ctggccgctaccgataccggcggctatgccgctaccgcggggggcaacgtgacgggtgcc
gtcagcaagaccgcaacctcgatgcaggatatcgtcaatatcatcgacgccgcacgtctg
gatgccaacggcaaaaaagtgaaaggcggcgcctatccgctggtaatcacctataccggt
aacgaagactcgttgatcaacgccgctgccgccaatatctgcggccagtggagcaaagac
ccgcgtggcgtagaaatcaaagagttcaccaaaggcatcaccatcattggcgccaacggt
tcttccgccaacttcggcatctggattaagaaatcctccgatgtggtggtacagaacatg
cgtatcggttacctgccgggcggcgctaaagatggcgacatgatccgcgtcgacgattcg
ccgaatgtctgggttgaccataacgaattgttcgccgccaaccatgagtgcgacggcacg
ccggacaacgacaccacctttgaatccgccgttgatatcaagggcgcgtcgaacaccgtc
accgtctcctacaactacatccacggtgtgaaaaaagtaggtttggatggttccagcagc
agtgataccggccgcaatattacctatcaccataactactacaacgacgttaacgcccgt
ctgccgttgcaacgtggtggtctggttcacgcttacaacaacctgtacaccaacatcacc
ggttccggcctgaacgtgcgccagaacggccaggcactgatcgaaaacaactggttcgag
aaggcgataaacccggtcacctcccgttatgacggcaaaaacttcgggacctgggtgctg
aagggcaacaacatcaccaaaccggccgacttctctacctacagcatcacctggacggcc
gacaccaagccttatgtgaatgccgacagctggacctccaccggcaccttcccgaccgtg
gcctacaactacagcccggtcagcgcacaatgcgtgaaggacaaactgcctggctatgcc
ggcgtgggtaaaaatctggccacgctgaccagcgcagcctgtaaataa
DBGET
integrated database retrieval system
