Dickeya chrysanthemi: Dd1591_0348
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Entry
Dd1591_0348 CDS
T00930
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dd1591_0348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dze03021
]
Dd1591_0348
03400 DNA repair and recombination proteins [BR:
dze03400
]
Dd1591_0348
Enzymes [BR:
dze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dd1591_0348
Transcription machinery [BR:
dze03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dd1591_0348
DNA repair and recombination proteins [BR:
dze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dd1591_0348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACT05238
UniProt:
C6CHC7
LinkDB
All DBs
Position
388073..389062
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHTEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagttagt
tcgacgcatgccaaggtgacccttgagccgttagagcggggcttcggccatactcttggt
aacgcactgcgccgtattctgctttcatccatgcctggttgcgcggtgaccgaggttgag
attgatggtgtactgcacgagtacagcaccaaagaaggcgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgacatcacccacgacggtgat
gtcgaaatcgtcaagccacagcatgtgatctgccatctgaccgatgagaatgcatctatc
aatatgcgtatcaaagttcagcgtggccgtggttatgtgccggcgtctgcccgtattcat
acggaagaagatgagcgcccgatcggtcgtttgttagtcgatgcttgctacagccctgtt
gagcgtatcgcttacaatgttgaagcagcacgtgttgaacagcgtactgacctggacaag
ctggttatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcaaccattctggctgaacaattggaagctttcgttgacttgcgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctt
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgcttaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcttctcgtggtctgtcactgggcatgcgcctggaaaac
tggccaccagcaagcattgctgatgagtaa
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