Dickeya chrysanthemi: Dd1591_1059
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Entry
Dd1591_1059 CDS
T00930
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dze03009
]
Dd1591_1059
Enzymes [BR:
dze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dd1591_1059
Ribosome biogenesis [BR:
dze03009
]
Prokaryotic type
rRNA helicases
Dd1591_1059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
Cas3-like_C_2
UBA_7
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACT05931
UniProt:
C6CNL1
LinkDB
All DBs
Position
complement(1222064..1223416)
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AA seq
450 aa
AA seq
DB search
MTATNFSEFDLDDSLLDALRDMGFSRPTAIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADQARAMAAHTHLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIQDFAERLLNDPITIEAEPSRRERKKILQWYYRADDIQHKTALLS
HLLKQPDVTRSIVFVRKRERVHELVDWLRSAGIESCYLEGEMVQAKRNEAIKRLSEGRVK
VLVATDVAARGLDIQDVSHVFNFDLPRTSDVYLHRIGRTGRAGRKGCAISLVEAHDYLLL
EKVGRYLNEPLKARVIDELRPSTRAPSPKSNGKPSKKVLAKRKEQKEKEKEKQKAKVKVR
HRDSKNIGKRRQPKAKTPAEQTKEKPVDNS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaccaatttttccgagtttgatcttgatgacagcctgcttgacgccttgcgc
gacatgggcttcagccgcccgaccgctattcaggccgaggccattcccccggcaatggaa
gggcgagatgtactcggctccgcaccgaccggaaccggtaaaaccgcagcctatctgctg
ccggttttacagcacctgctggatttcccacgtaaaaaatccggtccgccgcggattctg
attctgacaccgacccgggaactggcgatgcaggtagcggatcaggctcgggcgatggcc
gcgcatacccatctggacattgcgaccatcaccggcggcgtggcttatatgaatcacgcc
gaagtatttagtgaaaatcaggatgtggtcgtcgccactaccggccgtctgttgcaatac
atcaaagaagagaattttgactgtcgcgcagtagaaaccctgattctggatgaagccgac
cgtatgttggacatggggttcgctcaggacatcgagcatattgccggtgaaacccgctgg
cgcaagcaaaccatgctgttctccgcaacgctggaaggcgatgctattcaggattttgcc
gagcgcctgttgaatgacccgatcacaatagaagccgagccgtcgcggcgtgagcgtaaa
aaaattctgcaatggtactatcgcgctgacgacattcagcacaagacagcgctactcagc
cacctgcttaaacagccggacgtcacccgttcgatcgtgttcgtgcgcaaacgcgagcga
gtgcatgaactggtagactggttgcgctctgccggcatcgaatcctgttatctggaaggg
gaaatggtgcaggctaaacgtaacgaagccatcaaacggttgagcgaaggccgggtgaaa
gtgctggttgctacagatgtcgccgcacgcgggctggatattcaggacgtcagccacgtg
ttcaacttcgatttacctcgtacttccgacgtttatctgcatcgcatcgggcgcaccggg
cgggcaggccgtaaaggctgcgctatctcgctggtcgaagcgcatgactatctgctgctt
gaaaaggtcggccgttatctcaacgagccgttgaaagcgcgcgtcatcgatgaattacgc
ccgagtacccgcgcgccaagtcccaaatctaacggtaagccatcgaaaaaagtgctggcc
aagcgcaaagagcagaaagaaaaagagaaagaaaagcagaaggcgaaggtcaaagtgcgt
caccgcgacagcaaaaatatcggcaaacgccgtcaacccaaagccaaaaccccggctgaa
cagacgaaagaaaagccggtggataacagctga
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