Dickeya chrysanthemi: Dd1591_1994
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Entry
Dd1591_1994 CDS
T00930
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dze03016
]
Dd1591_1994
Enzymes [BR:
dze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Dd1591_1994
Transfer RNA biogenesis [BR:
dze03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dd1591_1994
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
RGS_DHEX
Motif
Other DBs
NCBI-ProteinID:
ACT06843
UniProt:
C6CHE2
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All DBs
Position
2279075..2280196
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AA seq
373 aa
AA seq
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MNYQLITTDEGLSAVCAQACAVSEVALDTEFVRTRTYYPQLGLIQLYDGDNLSLIDPLAI
RDWAPFRALLQNPQITKFLHAGSEDLEVFLNAFGCLPSPFIDSQILAAFLGKPLSYGFAA
LVADYRQVALDKSESRTDWLARPLSEKQCQYAAADVFYLLPVARTLVAETRAAGWLDAAL
DECRLLCQRRQEVLAPEMAYREIGNAWQLRGRHLACLQKLAAWRLRKARERDSAVNFIVR
EENLWQVARCLPGSLGELDSLGLSGPEIRYHGKTLLALVAESASLSEADYPPAVVNLIDY
PGYKKAFRDIKALVQQSAEQSGLSAELLASRRQINRLLNWHWKLVVTECEPEMISGWRGR
LFGPGLKTILADY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgattactaccgatgaaggattatcagcggtgtgcgcgcaggcgtgc
gcggtttccgaggtagcgctggacaccgaatttgtccgtactcgtacctattacccgcaa
ctggggctgattcagttgtatgacggtgacaatctgtcgttgatagacccgctggcgatc
cgcgattgggcaccgtttcgcgcgttgttgcagaatccgcaaatcaccaaatttcttcat
gccggcagtgaagatttagaagtttttctgaacgcgtttggttgcctgccgtcgcctttc
atcgatagccagattctggcggcatttctgggcaagccgctgtcttatggttttgctgcg
ttggtggcggactaccggcaagtggcactggataaaagtgaatcccgtaccgactggctg
gcgcgtccgctgagcgaaaagcaatgtcagtacgcggccgcggatgtgttttacctgctg
ccggtagccagaacgttggtcgcagagacgcgcgccgcgggttggctggatgcggcgctg
gatgagtgccggttattgtgtcagcgccgtcaggaggtgttggcgccggagatggcgtat
cgggagatcggtaatgcctggcaattgagagggcgccatctggcctgtttgcaaaaactg
gcggcatggcgtttgcgcaaagcgcgtgagcgcgatagcgccgtcaattttattgtccgt
gaagagaacctgtggcaggtcgcccgttgcctgccgggttcacttggggagcttgattcg
ctaggactgagcgggccggaaattcgttatcacggtaagacgttgctggcgctggtggcg
gaaagcgcgtcgttaagcgaagcggattacccgccggcggtggtcaatttgatcgattat
cccggctataagaaagcgtttcgcgatatcaaagcgttggtgcagcagagtgcggaacag
agtggcttgtcggccgagctgttggcatcccggcggcaaattaaccgcttgctgaactgg
cactggaaattggtcgtgacggaatgcgaacccgaaatgatctccgggtggcgtgggcgt
ttgttcgggcctggcttgaaaacgattctggcggattattga
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