Dickeya chrysanthemi: Dd1591_2152
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Entry
Dd1591_2152 CDS
T00930
Name
(GenBank) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Dd1591_2152
Enzymes [BR:
dze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Dd1591_2152
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
CarbopepD_reg_2
SdrD_B
Ig-like_KY
Shr-like_HID
NOMO_3rd
SpaA
Motif
Other DBs
NCBI-ProteinID:
ACT06995
UniProt:
C6CIE9
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Position
complement(2476779..2478596)
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AA seq
605 aa
AA seq
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MSSPFNEGKAGNHIQPVSSSWVRVVSMTWIKGKTYMQGRTYLIAVSLLCSSLAQAASSSD
VSMALSGMKAQIDNGLVSVAIGSDGSIGTLSNGSQNLIDKANSQVNALGKSSTGYLDYYS
GSFLKFKPQQISVIENSKDIVHVAYIDNETSTLSLEYHFIVRRGVSGIYSYAVARNDTSS
NLTVSELRGVYRFNPFLLDHISNGIRTTKPYLYSQLNNFEKIQDETWKLPDGSYYSKYDF
AGYMRKTPVWGVYGNNIGAWIIPGSTEYMSGDDTKQDLMVHQDGLAIMYMTGSHFGTPDL
IAPPGWQKLYGPWLLYVNAGSDDQMYRDALTRSQQEIADWPYKWVNDSRFPLDRTSVTGS
INTTQPLNVTLSSSLNEASDVQTLGYAFTTNTDSQGNFRFDKVRKGKYTLTVYANGGNRP
GVLYSDVVNVTGATQIPAIQLSEAAPVVWSIGKSDRLASEFRFGDQLRNYHWQNDVPANL
AYTVGQSSPAQDWYYAQTNPGSWNVNYVDRADGSGRVLNVAFAAASNRGMTNPTTPSLSV
LVNGTKVKDIQYDNDKALYRGAMNSGKYHYERISIDSGLLRDGNNTITFTLNGGTFMYDA
VTLTK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcgccctttaacgaaggaaaggccggtaatcacatccaaccggtttcttccagt
tgggttcgggtcgtgtcgatgacgtggataaaagggaaaacgtatatgcaaggtagaacc
tatcttattgcagtcagcctactctgttcttcgctggcgcaggcggcatcatcgtctgac
gtcagtatggcgctctcgggcatgaaagcgcaaattgataatgggctggtttctgttgct
atcggcagtgatggcagcattggtacgctgtcaaacggtagccagaatctgatcgacaaa
gccaatagccaggttaatgcgctcggcaaaagcagtaccggctatctggattattattca
ggctcatttttgaagtttaaaccacagcagatttctgttatcgaaaatagtaaagatatt
gtgcatgttgcttatatcgataatgaaaccagcacgctgagcctggaatatcatttcatt
gtgcggcgtggcgtcagtgggatttacagctatgcggtagcgcgtaatgatacctcatct
aacctcacggtcagtgaattacgtggcgtataccggtttaaccccttcctgctcgatcat
atctccaacggtattcgcaccacgaaaccctatctttattcccagctcaataactttgaa
aaaatccaggatgagacctggaaattgccggacggcagctattactccaaatacgatttc
gccggttatatgcgtaaaacaccggtgtggggtgtatacggcaataatatcggtgcgtgg
attattccaggcagtaccgagtatatgtccggcgatgacaccaaacaggatttgatggta
catcaggatggtctggcgatcatgtatatgaccggttcgcatttcggtacaccggatcta
atagcgcctccgggctggcagaaactgtatggcccctggttgttgtatgtgaatgcaggc
tcggatgaccagatgtatcgtgatgcgctgacgcgtagtcagcaggaaatcgccgactgg
ccttataagtgggtcaatgacagccgcttcccgctggatcgcaccagtgtcaccggcagt
atcaatacgacgcaaccactcaacgtgacgctatcgtcctcgttgaatgaagcgtcggat
gtacagacattgggttatgcctttaccaccaataccgatagtcagggtaatttccgtttt
gataaagtgcgcaaaggcaaatataccctgacggtttacgctaacggcggtaatcgaccg
ggtgtgctctacagcgacgtagtgaatgtaaccggcgccacgcagataccagcgattcaa
ctgtctgaggccgctccagtggtctggtctattggtaagagcgaccggttggcgtccgaa
ttccgttttggcgatcagttgcgtaattatcactggcagaatgatgtaccggctaatctg
gcgtataccgttggtcagtcgagcccggcgcaagactggtattacgcccagaccaacccc
ggcagttggaatgtgaactatgtcgaccgtgccgacggcagcggtagggtgctgaatgtg
gcgtttgccgctgccagcaaccgcgggatgaccaatccgacgacgccttcgttgtcggtg
ttggtcaacggcaccaaagtgaaagacattcagtatgacaatgacaaggcgttataccgt
ggggcaatgaacagcggtaaatatcactacgagcgaatttctatcgatagtggtttgctg
cgcgatggcaataacaccattaccttcacgctcaatggcggcactttcatgtacgatgcc
gtgacattaacgaaataa
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