Dickeya chrysanthemi: Dd1591_2162
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Entry
Dd1591_2162 CDS
T00930
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dze03032
]
Dd1591_2162
03400 DNA repair and recombination proteins [BR:
dze03400
]
Dd1591_2162
Enzymes [BR:
dze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Dd1591_2162
DNA replication proteins [BR:
dze03032
]
Prokaryotic type
DNA Topoisomerases
Dd1591_2162
DNA repair and recombination proteins [BR:
dze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dd1591_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
E217_gp28
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACT07005
UniProt:
C6CIF9
LinkDB
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Position
complement(2487574..2490177)
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AA seq
867 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHVRDLPTSGSGSASKKSAEANGEKAKKA
VKKDERTALVNRMGVDPYRGWQAHYEILPGKEKVVSELKMLAQNADHVYLATDLDREGEA
IAWHLREIIGGDEKRFSRVVFNEITKNAIRQAFENPGELNINRVNAQQARRFMDRVVGYM
VSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWELHADLLANAETALQMQV
THHHGKPFRPVNQAQTQAAVSLLEKASYVVNEREDKPTSSKPGAPFITSTLQQAASTRLG
FGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALSMARDYIQGEFGKRYLPDAPNLYTSK
ENSQEAHEAIRPSDVSVLADQLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLVVSAA
DYQLRAKGRTLRFDGWTKVMPALRKSDEDRTLPAVEIGQSLSLEKLSPSQHFTKPPARYS
EASLVKELEKRGIGRPSTYAAIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEDNFRELM
NYDFTARMENSLDLVANSQAEWKAVLDEFFAEFSQQLETAEQEPDEGGMKPNQMVLTSID
CPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLIPEAEVLNVLEGDEAETNALRA
RRRCSKCGTAMDSYLIDNQRKLHVCGNNPSCDGYEIEQGEFRLKGYDGPVVECEKCGSEM
HLKMGRFGKYMACTSDSCGNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAG
VFLAANTFPKSRETRAPLVEELVRFRDRLPEKLRYLADAPVTDPQGNKTLVRFSRKTKQQ
YVSSEKEGKATGWSAFYVDNKWVETAR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgtcgagtccccggcaaaggccaaaacgattaataagtac
cttggcaatgactacgtggtgaaatccagcgtagggcatgtccgcgacttgccgaccagc
ggttcgggttccgcgagcaagaaaagcgctgaagccaatggcgagaaagcgaaaaaagcg
gtcaagaaagatgagaggaccgcgctggttaaccgtatgggggttgatccttaccgcggt
tggcaagcccattatgagatcctgcccggcaaggaaaaagtggtttcggaactgaaaatg
ctggcgcaaaacgctgatcacgtctatctcgcaaccgaccttgaccgcgaaggggaagcc
attgcctggcacctgcgggaaattatcggtggggatgaaaaacgcttcagtcgcgtggtg
ttcaacgaaatcaccaagaatgcgattcgtcaggcgttcgagaatccgggcgagttgaac
atcaaccgtgtcaacgctcagcaggcgcgccgtttcatggatcgcgtggtgggatacatg
gtatcgccattgctgtggaaaaagatcgcccgaggtttgtctgccgggcgtgttcagtcg
gttgcggtgcgcctggtggtggagcgcgagcgtgaaatcaaagcgtttgtgccggaggag
tactgggagttacatgccgatctgctggcgaatgcagaaacggcgttgcagatgcaggta
acgcatcatcatggtaaacctttccggccggtgaatcaggcgcagacgcaagccgcggtc
agcctgctggagaaagccagctatgtggtgaacgagcgggaagataagccgaccagcagc
aaaccgggcgcgccgtttattacgtcgacattgcagcaagccgccagtacgcgtctcggg
tttggggtgaaaaaaaccatgatgatggcgcagcgattgtatgaagccggccacatcacc
tatatgcgtaccgactcaactaacctgagtcaggatgcgctgtcgatggcacgtgattat
attcagggcgagtttggtaaacgctacctgccggatgcgccgaatctctataccagcaag
gaaaattcacaggaagcgcacgaagcgatccgtccttccgacgtcagcgtactggctgac
cagctcaaagacatggaagccgatgcgcagaaactgtatcaactgatctggcgccagttc
gtcgcgtgtcagatgacgccggcgcagtatgactccactacgctggtcgtgagtgcggcg
gattatcaactgcgcgccaaagggcgtaccctgcgctttgacggttggaccaaagtgatg
cctgcgttgcgtaagagcgatgaagataggaccttgccggctgtggagataggacaatcg
ttatctctggaaaaattgtcgcccagccagcactttaccaagccgccggcccgttacagc
gaagcgtcgctggtgaaagaactggaaaaacgcggtatcggccgtccttctacctatgcc
gccatcatctctacgattcaggatcgtggttatgtgcgggtggaaaatcgtcgtttttat
gcggaaaaaatgggagaaatcgtcacggaccgtctggaggataacttccgcgagctgatg
aactacgattttaccgctcgtatggaaaacagcctcgacctggtcgccaacagtcaggcg
gaatggaaagcggtactggatgagttcttcgccgagttcagccagcaactggaaaccgcc
gagcaggagccggacgaaggcgggatgaagccgaaccagatggtgctgaccagcattgat
tgtccgacttgtggtcgcaaaatggggattagaaccgccagtaccggtgtgttcctgggg
tgttccgggtatgcactgccgccgaaagagcgctgcaaaaccaccatcaacctgatcccg
gaagcggaagtgttgaacgtgctggaaggcgatgaggcggaaaccaacgcattgcgtgct
cgtcggcgttgttcgaagtgcggtacggcgatggacagctatttgattgataaccagcgc
aagctacatgtttgtggtaataacccatcttgcgacggctacgagatagaacaaggcgaa
ttccggcttaagggttatgacggcccggtggtggaatgtgagaagtgcggttcggaaatg
cacctgaaaatggggcgtttcggtaaatacatggcttgtaccagcgacagttgcggcaat
acccgcaaaattctgcgtaatggtgacgtcgcgccgccgaaagaagacccggtgccgctg
cctgaattgccgtgtgaaaaatccgatgcgtattttgtactgcgtgacggtgcggcgggg
gtattcctggctgccaacaccttcccgaaatcacgcgaaacccgtgcgccgttggtggaa
gagctggtgcgttttcgtgatcgcttaccggaaaaactgcgttatctggctgatgcgccg
gtcacggacccgcaaggcaataaaacgctggtacggtttagccgcaaaaccaaacagcag
tacgtttcctcggaaaaagagggtaaagcgaccggatggtcggcgttctatgttgataat
aaatgggtagagactgcccgttga
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