Dickeya chrysanthemi: Dd1591_2510
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Entry
Dd1591_2510 CDS
T00930
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd1591_2510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dze03019
]
Dd1591_2510
Enzymes [BR:
dze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dd1591_2510
Messenger RNA biogenesis [BR:
dze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dd1591_2510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ACT07350
UniProt:
C6CLA4
LinkDB
All DBs
Position
complement(2866257..2867624)
Genome browser
AA seq
455 aa
AA seq
DB search
MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLNERPVLAKGRRPVRALILTPTRELAAQIGENVLAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILIATPGRLLDLEHQNAVDLSQVDILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHFVDKKRKRELLSHLI
GKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAASTGEALSLVCVDEHKLLRDI
ERLLKREIPRIAIPGYEPDPTIKAEPIQNGRQGGRGGHGGAPRQGDRSQGERASGRPQGD
RPHQPRRDGASRPAGQRPEGQSARRRPPRKPAGGQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatctctcggtctgagtgccgatattttgcgcgctgtggaagagcagggc
taccgtgagccgacgccggttcagcgtcaggccattccggtcgtgctggaagggcgcgac
ctgatggccagcgcccagaccggcaccggcaaaaccgccggtttcaccctgccgctgctg
caattgctgaacgaacgcccggtgctggcgaaaggccgccgtccggtgcgggcgttgatc
ctgacgccgacccgtgagctggccgcgcaaatcggcgaaaacgtgctggcgtacagcaaa
tatctgcgtctgcgttcactggtggtgttcggcggcgtcagcattaatccgcagatgatg
aagctgcgtggcggcgtggatattctgattgccacaccaggtcgtctgctggatctggaa
caccagaacgcggttgacctgtcgcaggtggacattctggtgctggatgaagccgatcgg
atgctggatatgggctttatccacgatattcgccgggtgctggcgaagctgccgcccaaa
cggcagaacctgctgttttccgccactttctccgacgagatcaaagaacttgccggcaaa
ctgctcaccaatccggcgtcggtggaagtggtgcgccgcaacaccccgtccgagctggtg
acccagcacgtgcatttcgtcgacaaaaaacgtaagcgtgagctgctgtcgcacctgatc
ggcaaacacgactggcggcaagtgctggtgtttacccgtaccaagcacggcgccaaccat
ctggcggagcaactgaacaaagacggtatcaccgccgccgctattcacggcaacaagagc
cagggggcgcgtactcgtgcgctggcgaatttcaaagacggcgacatccgtgtgctggtg
gcgacggatatcgctgcccgcgggctggatatcgaccagttgccgcacgtggtgaactat
gaactgccgaatgtgccggaagattacgtacaccgtatcggacgtaccgggcgggcggcg
tctaccggcgaggcgttgtcgctggtatgcgttgatgagcataaactgctgcgcgatatc
gagcgcttgttgaagcgggaaattccgcgtattgccattccgggttacgagccggacccg
accatcaaagccgagccgatccagaatggccggcagggtgggcgcggtggtcacggcggt
gcgccgcgtcagggtgatcgttcgcaaggcgaacgcgcatcagggcgaccgcaaggtgac
cgtcctcatcagccgcgccgtgacggcgcatcccgcccggccggacaacgcccggaaggg
caatctgcccgccgccgcccgccgcgtaaaccggctggcggccagtaa
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