Dickeya chrysanthemi: Dd1591_3108
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Entry
Dd1591_3108 CDS
T00930
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dze03400
]
Dd1591_3108
DNA repair and recombination proteins [BR:
dze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dd1591_3108
Archaeal homologous recombinant proteins
Dd1591_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
TsaE
NTPase_1
nSTAND3
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACT07930
UniProt:
C6CEM4
LinkDB
All DBs
Position
3542590..3546273
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQDEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVSPGHNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLAMIADITGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISERVFERHKEAQSQLETLRAKVATLELLSDEQRQALEQQLDAIRQQEHSLSIHREE
VLAHQRWYDSLLQLQQTQKQALQQQSVHQQLQQQSQPQLDKLQRSEPAEKLRPLYDERGR
AQREKQRLNQQLTSVRQQIGRQQDAMNQLKIQLEKALSTRQQHAEHRQQQETLINERILP
LDHHIATLQTQRAQQQQAIDSLIEQQKTLIAGLARLQRQQEQTRLRLEEIENYRRQHSRH
QHLGSHIPLWQAQFPQQLKWQQDLHVVQEKAAQQQIQAEYLDQQRTSLVEKQQAQQLACE
RARQRLNEHLQQDEQLEAEYPLANLRQQLARRAAERPDRQQLATSAAVLQQLISQRTLLE
VQQLETQRRIQALEEQQVQQRRDYQNQASHLVDLDKRHELELHIVSLERERQQLQPGKEC
PLCGSTHHPAVERYQALRPSETQLRLHALRQEVDALKANVVQTETQLQLQKQHRQQQQNA
LESVQRDYESLRLQCQSVSERLLVSFDPLQLPTLHQWIDECDAQEQSLQTQIASRERNQR
TIQESKDLLTSAQQLLAQTLQQLELNTQQQSALQTSRDELQRLLDKTERELQRLHDSLSQ
TMETFGLTAPSLAQQEEWLRQRQTEWLRWQENEHEQHQCQPQLAAQAAEITAGQRRLEET
DVAIKTGQLQLAETQRTLEQAQQQRWQLLGNQAVNDVLKQLRQVSQALELENQQAQQQWQ
QGQSLLSRLNGEIDSLEQQSQHADSVLQQLQTQFDAALAEAGFSDAIVFREALLDEGERH
QLITLKERLSQRQQQVEALLQQAGSALEQHQATRPESMPEGINDWDIRQLLAGLGDMVKV
EVERQGELRQQLASDQQRRDKQRQLLDAIERGQQVCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSAKTRIDSLFLDEGFGTLDSETLDTALDVLDNLNASGKTIGVISHVEAMK
DRIQVQIRVKKRNGLGISQLDSTYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactcgctgcaagatgagtggaaaatc
gacttcacgcgcgagcctttcgccagtaacagcctgttcgccatcaccggcccgaccggt
gcaggtaaaaccaccttgctggacgccatctgtctcgcgctgtaccaccagacgccgcgt
ttgaaggtcagtcccggtcataacgaactgatgacgcgccacaccgctgaatgtctggcg
gaggtcgagttcgaagttaaaaacgtcgcctaccgcgcgttctggagccagcgccgcgcg
cacaacagcccggaaggcaatttgcagccccccaaagtggaactggcgctgtgcgccgac
ggcaaaatccttaccgataaagtgaacgacaagctggcgatgatagccgatatcaccggg
ctggatttcgatcgtttcaccaaatcgatgatgttatcccaggggcagttcgccgccttc
ctcaacgccgatgccaatcagcgggcggagttgctggaagaactgaccggcaccgatatc
tacggccagatttcagaacgggtattcgaaaggcacaaagaagcacagagccaactggag
actctgcgggcgaaagtcgccacgctggagctattgagcgatgaacaacgccaggcactg
gaacagcaactggacgccatccgccagcaggaacactcgttatcgatacaccgggaagaa
gtgctggcgcaccagcgttggtatgactcgctgctgcaactccagcagacgcaaaagcag
gccctgcaacagcaatccgtgcatcaacaattacagcaacaatcgcaaccgcaattagat
aagctgcaacgtagcgaaccggcggaaaaattgcgcccgctttatgatgagcgcgggcgc
gcgcaacgggaaaaacagcggctgaatcaacaattaaccagtgttcgccagcaaatcggc
cgccagcaggacgccatgaaccagttgaaaatacagctggaaaaagcgctgtctacccgc
cagcaacacgccgaacaccgccaacagcaagagacattgatcaacgagcgcattctgccg
cttgaccaccatatcgccaccttgcagacgcagcgcgcccagcagcaacaggcgatagat
agcctgattgaacaacaaaagacgctgatagccggcctggccaggctacaacgccagcaa
gaacaaacacggctgcggttggaggagatagaaaattatcgtcggcagcatagtcgccac
cagcatctgggcagccatattcccttgtggcaagcgcaattcccccagcaactgaaatgg
cagcaggacctgcacgtggtgcaggaaaaagcggcgcaacaacagattcaggcggaatac
cttgaccagcagcgcacgtcgctggtcgaaaaacaacaggcgcaacagctcgcctgtgaa
cgcgcccggcaacggcttaacgagcatctgcaacaggatgaacaactggaagcggagtac
ccgctggcaaacctgcgtcagcagttagcgcggcgtgcagcggaacggccggatcgccag
caactggcgaccagcgccgccgtactgcaacagttaatcagccagcgtaccttgctggaa
gtacaacagttggaaacgcaacgccgaattcaggcgctggaagaacagcaagtgcagcag
cgtcgcgactatcagaatcaggccagccatctggtcgatctcgacaaacgtcacgaactg
gaactgcacatcgtcagcctggagcgggaacgccagcagctccaaccgggcaaagagtgt
cccctgtgcggttcaacgcaccacccggcggtggagcgttatcaggcgctgcgtccgtcc
gaaacccagcttcggctacatgcgttgcgtcaggaggtggacgcactgaaagccaacgta
gtgcagaccgaaacccagcttcagttgcaaaaacagcaccgccagcagcagcaaaacgca
ctggaaagcgtccagcgcgattacgagtcgctgcggttgcagtgccagtctgtcagtgag
cgcttactggttagcttcgatccgctgcaactgccgacgttgcaccagtggattgatgaa
tgtgacgcgcaggagcaatcgctacagacacaaatcgccagccgtgagcgcaatcagcgc
actattcaggaaagtaaggatttactgacttcggcacagcaactgctggcgcaaacccta
cagcaactggagctaaacacccagcagcaatcggcgttgcagacctcgcgggatgaacta
cagcgattactggacaaaaccgaacgcgaattacaacgcctgcacgatagcctgagccaa
acgatggaaacgttcgggctgacggcaccctcgctcgctcagcaggaggagtggctgcgc
cagcgccagaccgaatggttacgctggcaggaaaacgaacacgagcagcatcagtgccaa
ccgcaactggcggcacaagccgccgagatcaccgccggccagcgacgactggaagagacc
gatgtcgccatcaaaaccggccagttacagttggcggaaacacaacgcacgctggagcag
gcgcagcaacaacgttggcaactcctgggcaaccaggcggtgaacgacgtgctgaagcag
ttgcgacaggtcagccaggcgctggaactggagaatcaacaggcgcagcagcaatggcaa
caaggccagtcgctgttaagccgcctgaacggagaaatcgacagtctcgaacagcaaagc
caacacgcagacagcgtgttgcaacaactgcaaacccagtttgacgcagcgctcgccgag
gccggattcagtgatgccatcgtctttcgtgaagctctgctggacgaaggggaacgccat
cagctcattacgctgaaagagcggctcagccaacgtcaacaacaggttgaagcgttattg
caacaggccggcagcgcgttggagcaacatcaggcgacccggcccgaatcgatgccggaa
ggcatcaacgactgggatattcgtcagttgcttgccggtctgggcgacatggtgaaagtc
gaagtcgaacgtcagggcgagctgcgccagcaattagccagcgaccaacaacgccgcgac
aaacaacgccagttgctcgacgctatcgaacgcggccagcaagtgtgcgatgactggggc
tacctcaaccagctaatcgggtcgcaaaaaggcgacaaattccgccgtttcgctcaaggg
ttgacgctggaccatctggtctttctggccaaccgccagctctctcgtctgcacgggcgc
tacctgctgcaacgcaaggcttccgacaccctggagctacaggtggccgatacctggcag
gccgatgccgttcgcgatacccggacattatccggcggcgagagttttctggtcagcctg
gcgctggcgctggcgttgtccgatttggtcagcgccaaaacccgtatcgactcgctattc
cttgatgaaggtttcggcacgctggacagcgaaacgctggataccgcgctggacgtgctg
gataacctcaatgcgtccggcaagactatcggcgtaatcagccatgtcgaagcgatgaaa
gaccgcatacaggtgcagatccgggtcaaaaagcgcaacggcctcggcatcagccagctc
gatagcacgtacgccgtgaaataa
DBGET
integrated database retrieval system
