Dickeya chrysanthemi: Dd1591_3231
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Entry
Dd1591_3231 CDS
T00930
Name
(GenBank) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Dd1591_3231
Enzymes [BR:
dze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Dd1591_3231
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
BcsB
EMC7_beta-sandw
Rhamnogal_lyase
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ACT08051
UniProt:
C6CHU4
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Position
3676087..3677829
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AA seq
580 aa
AA seq
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MMKPLQAWRTPLLTLAFVLPLTATGAVQLTLDGMNSTLDNGLLKVRFGADGSAKEVWKGG
TNLISRLSGAARDPDKNRSFYLDYYSGGVNEFVPERLNVIKQTPDMVHLAYIDDQNGKLR
LEYHLIMTSGVSGLYSYVVAANTGAAPVTISELRNVYRFDATRLDTLFNSIRRGTPLLYE
ELEQLPKVQDETWRLPDGNVYSKYDFAGYQRESRYWGVMGNGYGAWMVPASGEYFSGDAL
KQELLVHQDAIILNYLTGSHFGTPDMVAQPGFEKLYGPWLLYINQGNDRELVADVSRRAE
HERASWPYRWLDDSRYPRARATVSGRLRTDAPHATVVLNSSKEEFDVQTTGYLYTTRTHR
DGRFNLDNVPPGEYRLSAYADGGTQIGLLAQQTIQVDGKKTRLGQIDAQRPAPLVWAIGQ
ADRRAEEFRFGDKLRQYHWQTEVPANLTFDIGKSRERKDWYYAQTQPGSWHIQFTTRTPE
QPYTLNIALAAASNSGMTTPASSPQLAVKLNDQLLTTLKYDNDKAIYRGAMQSGRYHEAH
IPLPAGILQPGSNRITLELQGGMVMYDAITLTETPSRTQP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacctctacaggcatggcgtaccccgttgttgacgttggcatttgtgctgccg
ctgacggcgacaggcgccgtacagctaacgctggacggtatgaacagcacgttggataac
gggttgctgaaagtgcgcttcggcgcagacggcagcgcaaaagaagtatggaaaggcggt
actaacctgatttcccgcctctccggcgcggcgcgcgacccggataaaaatcgcagcttt
tatctcgattactactccggcggcgtcaacgaattcgtaccggagcggctaaacgtcatc
aaacagacgccggacatggtgcacctggcctatatcgatgaccagaacggcaagctgcgg
ctggaatatcacctgatcatgaccagcggcgtcagcgggctttacagctacgtggtggcc
gccaataccggcgcagcgccggtaaccatcagcgaactgcgcaacgtttatcgctttgac
gccacccggctggataccttgttcaatagcatccggcgcggcacgccgctgctgtacgaa
gaactggagcagttacccaaagtgcaggatgaaacctggcggctgcctgacggcaatgtc
tactccaaatacgactttgccggttatcagcgcgaaagccgctactggggggtgatgggt
aacggttacggcgcctggatggtgcccgccagcggtgagtacttctcgggcgatgcctta
aaacaggaactgctggtgcatcaggatgcgattatcctgaactaccttaccggctcgcac
ttcggcacgccggatatggtggcgcagccgggctttgaaaaactctatggcccgtggctg
ctgtacatcaatcagggcaacgaccgggaactggtggcggatgtgagccgccgggctgaa
catgagcgcgccagttggccttaccgctggctggatgattcgcgctatccccgcgcacgc
gctaccgtcagcggccgcctgcgcaccgatgcgccacatgctaccgtggtgttgaacagc
agtaaggaagagttcgacgtccagacgaccggttacctgtacaccacgcgaacccatcgg
gatggccgctttaacctggacaacgtgccgccgggtgagtaccggttgtcggcttacgcc
gacggcggcacacaaatcggcctgttggcgcagcaaaccatccaggtcgacggtaaaaaa
acccggctcggccagattgacgcccaacgccccgcgccgctggtatgggccatcggccag
gctgaccgacgcgctgaagagttccgcttcggcgataagctacgccaatatcactggcaa
accgaagtaccggccaacctgactttcgacatcggtaaaagccgcgaacgcaaggactgg
tactacgcccagactcaaccgggcagctggcatatccagtttactacccgcacgcctgag
cagccttacaccctgaatattgcgctcgccgccgccagcaacagcggtatgacgacaccc
gccagctcgccgcagttggcggtgaagctcaacgatcaattgctgacgacgctgaagtac
gacaacgacaaggcgatttatcggggagccatgcaaagcggccgttaccatgaagcgcat
attccattgccggccggcatactgcaaccaggcagcaaccgcattacgctggagttgcag
ggaggaatggtgatgtacgatgccatcacgctgacggaaacgccgtcacgtacgcaaccc
tga
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