Dickeya chrysanthemi: Dd1591_3461
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Entry
Dd1591_3461 CDS
T00930
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dd1591_3461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dze03019
]
Dd1591_3461
03016 Transfer RNA biogenesis [BR:
dze03016
]
Dd1591_3461
Enzymes [BR:
dze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Dd1591_3461
Messenger RNA biogenesis [BR:
dze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dd1591_3461
Transfer RNA biogenesis [BR:
dze03016
]
Prokaryotic type
tRNA degradation factors
Dd1591_3461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
DUF4172
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ACT08273
UniProt:
C6CJP1
LinkDB
All DBs
Position
complement(3932156..3934276)
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKHAKPGQDFFPLT
VNYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPDGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTEELKTSRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQIVIENIKSLTAEAGKPKWSWQAPDVNV
ELHNRVQALSEARLGDAYRITEKQERYAQVDTIKADVVAALLAEDETLDENELRDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKPEA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAQPQEAAPVSEAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatccgatcgttcgtaaattccagtacggccaacataccgtaacgctggaaacc
ggtatgatggcccgtcaggctactgccgctgtgatggttagcatggatgacactgcggta
tttgtaaccgttgtgggtgccaaacacgctaaaccggggcaggactttttcccgctgact
gttaactatcaagagcgtacctatgcggctggccgtattcccggtggttttttccgccgt
gaaggccgcccgagcgaaggcgaaacgctgatctcccgtttgattgaccgtccgattcgt
ccgctgttcccagatggtttcgttaacgaagtccaggttattgccactgtggtttccgta
aatccgcaggttaacccggatatcgttgccatgatcggtgcttctgcggcgctgagcctg
tcgggtatcccgttcaatggcccgattggtgccgctcgcgttggttacatcaacgatcag
tacgtgctgaacccgacgactgaagagctgaaaaccagccgcctggacctggtagtagca
ggtaccgaaggcgcggtgctgatggtggaatccgaagcggatctgctgagcgaagatcag
atgctgggtgcggtggtatttggtcatgatcagcaacagattgttatcgaaaacatcaag
tcgctgacggcagaagccggcaaaccgaagtggagctggcaggcaccggacgtgaacgtc
gaactgcacaaccgtgtgcaggcgctgtctgaagctcgtctgggcgacgcttatcgcatc
actgaaaaacaagaacgctacgcgcaggttgataccatcaaagctgacgtggttgcggct
ctgctggcagaagatgaaacgctggacgaaaacgaactgcgtgacatcctcggcagcatc
gagaagaacgtggtacgtagccgtgtgctgcgtggcgaaccgcgtatcgacggtcgcgaa
aaagacatgatccgtggtctggatgtacgtaccggcgtgctgccgcgtactcacggctcc
gcgctgttcacccgtggtgaaactcaggcgctggtgaccgcgacgctgggtactgagcgt
gatgcacagactatcgatgagttgaccggcgagcgtaccgatcgcttcctgctgcactac
aacttccctccgtactccgtgggtgaaaccggtatggttgggtcgccgaaacgccgcgaa
atcggtcacggtcgtctggctaaacgtggcgtgctggctgttatgccgaaaccggaagcc
ttcccatacaccgtacgtgttgtgtctgaaattaccgaatccaacggttcttcttccatg
gcttccgtctgtggtgcttctctggcgctgatggatgccggcgtaccgatcaaagccgcc
gttgccggtatcgcgatgggtctggtgaaggaaggcgacaactacgttgtgctgtcggat
attctgggtgacgaagaccacctgggcgatatggacttcaaagtagccggtagccgtgaa
ggcgtgaccgcgttgcagatggacatcaaaatcgaaggtatcacccgcgaaatcatgcag
gtggcgctgaaccaggccaagggtgcgcgtctgcacattctgggcgtgatggaacaggct
atcagcacgccgcgtggcgatatctccgaattcgcaccgcgtatccacaccatcaagatc
agcaccgacaagatcaaagatgtgatcggtaaaggcggttctgttatccgtgcgctgacc
gaagaaaccggtacgactatcgagatcgaagacgacggtacggtgaagatcgcctcgacc
gacggtgaaaaagccaaacatgcgattcgccgtatcgaagagatcacggctgaaatcgaa
gtgggccgtatctatcagggtaaagtgacccgtatcgttgactttggcgcttttgttgcc
attggcggcggcaaagaaggtctggttcatatttctcagatcgccgacaagcgtgtcgag
aaagtgactgactacctgcagatgggccaggaagtgccggttaaggtgctggaagtggac
cgtcagggtcgtgtccgtttgagcataaaagaagcaaccgctcaacctcaggaagctgct
ccggtttccgaggcagaataa
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