Dickeya chrysanthemi: Dd1591_3957
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Entry
Dd1591_3957 CDS
T00930
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dd1591_3957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dze03400
]
Dd1591_3957
Enzymes [BR:
dze01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Dd1591_3957
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dd1591_3957
DNA repair and recombination proteins [BR:
dze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dd1591_3957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ACT08757
UniProt:
C6CP14
LinkDB
All DBs
Position
complement(4477869..4478678)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPWLVGHTISYAEVRNARLRWPVSPEILSLSDVPVLSVQRRAKYLL
IELPTGWIIVHLGMSGSLRVLPEYCEPEKHDHVDLIMDSGKVLRYTDPRRFGAWLWCDDP
ATSSVLAHLGPEPLSDDFSGDYLFKQSRGRKTPVKLWIMDNKLVVGVGNIYASESLFNAG
ILPERLAGSLSQAEADQLAHSIKQVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRG
GQPCHHCGTLIDSIKQGQRSTFFCKRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccggaagtggaaaccagtcgccgcggtatttcgccctggctggtcggt
cataccatttcgtatgctgaggtacgcaatgcgcgtctgcgctggcctgtctcccctgaa
attctgtcgctgagcgatgtgccggtgctgagtgtgcagcggcgcgccaaatacctgctg
attgagctgccgaccggctggataatcgtccatctggggatgtccggtagtctgcgggtg
ttgccggaatactgtgaaccggagaaacatgaccatgtcgatttgatcatggatagcggt
aaagtgctgcgctataccgatccgcgtcgtttcggtgcctggttatggtgtgatgacccg
gcgaccagttcagtgttggcgcatctggggccggagccgctgagcgacgatttttccggt
gattatctgtttaagcaatctcgcggccgtaagacgccggtcaagttgtggattatggat
aacaagctggtggtgggcgtcggtaatatttatgccagcgagtcattgtttaatgccggt
attctgccggaacgattggccggctcactgtcgcaagcggaagcggaccagttggcgcat
tccatcaaacaggtattacagcgttccattgagcagggtggcaccacgttgcgggatttc
ctacagtctgatggaaaaccgggttatttcgcgcaggagttgcaggtctatggccgcggc
ggccagccttgtcaccactgcggcacgctgatcgacagcatcaagcagggccagcgcagt
accttcttctgcaagcgctgccagcgttag
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