Durio zibethinus (durian): 111274432
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Entry
111274432 CDS
T05242
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A-like
KO
K12856
pre-mRNA-processing factor 8
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111274432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111274432
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111274432
Complex C
U5 SnRNP specific factors
111274432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111274432
NCBI-ProteinID:
XP_022714812
UniProt:
A0A6P5WFU9
LinkDB
All DBs
Position
Unknown
AA seq
2353 aa
AA seq
DB search
MWNNNNNGAQIAPPGTGGSTIPPPPAAQPSYTVLAPQTTPQEVEAKLEEKARKWMQLNSK
RYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFIPHAVYKLL
ENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKR
MRFPPFDDEEPPLDYADNLLDVDPLEPIQLEMDEEEDSAVYAWFYDHKPLVKTKLINGPS
YRRWHLPSNMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRD
MEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMIMYIKTEDP
DLPAFYYDPLIHPITTTNKERREKKIYDDEDEDDFVLPEGVEPFLNDTQLYTDTTAAGIS
LLFAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRP
PKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFN
LKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYTFS
HVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRG
IVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQ
NKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRR
GATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFS
PIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKR
HLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPA
DSEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDH
NIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLILGLTRASEIAG
PPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNE
NMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNP
NLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFEN
RVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIG
LNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEED
QLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTL
FQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVE
GILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELD
ALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDMFDQKASNKYWV
DVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGS
KPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTA
EEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKF
GDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVT
EPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQ
RQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISATN
LYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEI
RCIAMPPQWGTHQQVHLPSTLPEHDFLNDLEPLGWMHTQPNELPQLSPQDVTAHARILEN
NKHWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQML
LSDRFLGFYMIPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNLEE
GETAEGDREDTFT
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacaacaataacggcgctcagatagcgccaccgggaactgggggatccacc
atcccgccgcctcctgctgcgcagccttcgtacacagtgctggcaccgcagacgactccg
caggaggtggaggcgaagctggaggagaaggctcggaaatggatgcagcttaactctaag
agatatggagataaaaggaagtttggttttgtcgagacgcagaaggaggacatgccaccg
gaacacgtcaggaagattatcagagaccatggggacatgtcctcaaaaaaatatcgccat
gacaaacgtgtatatcttggggcccttaaattcattccacatgcagtttacaagctcctt
gagaatatgccaatgccttgggaacaagttcgtgatgtgaaggtcttataccatattaca
ggagcgatcacatttgtgaatgaaataccatgggttgttgaaccaatttatttagcacag
tggggtacaatgtggatcatgatgcgaagggagaaaagagatcgtcgtcatttcaagaga
atgcggtttccaccatttgatgatgaggaacctccattagactatgctgataatctgtta
gatgtcgatcctctagagccaattcaattggagatggatgaagaagaagattctgctgta
tatgcttggttttatgaccataagcctcttgtaaaaacaaagcttatcaatggtccaagt
tacaggagatggcatcttccttccaatatggcaactttgcaccggcttgctggacagctg
ctttctgatttgattgaccgtaattatttctacttgtttgacatggagtcattcttcaca
gctaaagcattaaacatgtgcatacctggtggtccgaaatttgaaccactataccgtgat
atggagaaaggggatgaggactggaatgaatttaatgacataaacaaactcattatccgg
tcacctcttaggactgagtaccgaattgctttccctcatctttataacaataggcccagg
aaagtaaagctttgtgtgtatcacactcccatgatcatgtacattaaaacagaagaccct
gatttaccagcattctattatgatcctttgatacaccccataactaccacaaacaaggag
cggcgtgagaagaaaatttatgatgatgaggatgaagatgattttgtcttgccggaaggg
gtggaaccttttctgaatgacacacagctttacactgacactactgctgctgggatttct
cttttgtttgctccacgcccttttaatatgaggtctggccggatgcgacgtgctgaagat
ataccacttgtgtcagagtggtacaaagagcactgtcctccatcttatcctgttaaagtg
cgggttagttatcaaaaactattgaaatgctttgtgctgaatgagctgcatcatagacca
cctaaggctcagaagaagaagcacttgttccggtctctacaggcgactaagttttttcaa
acaacagagcttgattgggttgaagcaggtcttcaagtttgcaagcaagggtacaacatg
ctgaacctattgatacataggaaaaatttgaactaccttcacctggattacaacttcaac
ttgaagccggtgaagactctcaccacaaaagagcgcaagaagtcacgttttggcaatgca
tttcatctttgtcgtgagatcctgcgtttaacaaagcttgtagttgatgccaatgttcag
tttcgacttggcaatgttgatgcctttcaattggctgatggtctgcagtatacattttcc
catgttggtcagttgactgggatgtaccgttacaagtaccggctcatgagacagattagg
atgtgcaaagacttgaagcacttaatttactatcgcttcaatactgggccagtggggaaa
ggacctggatgtggattttgggctccaatgtggagggtgtggctgtttttccttcgtggc
attgtgcctcttctagaaaggtggttaggaaatctgcttgcacgtcagtttgaagggcgt
cattcaaaaggagtggccaagactgttaccaagcaacgtgttgagagccactttgatctg
gaacttcgagctgctgtcatgcacgatgttcttgatgccatgccagagggcattaagcaa
aataaagctaggacaatattgcagcatctcagtgaggcatggcgctgttggaaggcaaac
atcccatggaaggttccgggtttgccagttcccattgagaatatgatccttagatatgtc
aagtcaaaagctgactggtggacgaatgttgctcattacaaccgtgaacgtatcagaagg
ggtgcaactgttgataaaacagtttgcaggaaaaacttaggcagattgacacgcctctgg
ctgaaagccgaacaagaacgacagcacaattatttgaaagatgggccatatgtaactccg
gaagaagcagttgccatttatactacaactgtgcattggttggaatcaagaaaattctct
cccattccatttcctcctttgtcttacaagcatgatacaaagctacttatccttgcactg
gagaggttgaaggaatcttacagtgtagctgtgagattaaaccaactccaaagagaagaa
ttgggtctaattgaacaagcttatgataatcctcatgaggccttatcaaggatcaagcgc
cacctgcttactcagcgtgccttcaaagaagttggtatagagttcatggatttgtacagc
tatttgattccagtctatgaaattgagccccttgagaagattacagatgcttatcttgat
caatacctatggtatgaaggagacaagcgccacctgtttcctaattggattaagcctgca
gattcagaaccacccccacttttggtttacaaatggtgtcaaggtataaacaatttgcaa
gggatatgggacacaagtgaggggcagtgtgtggtaatgcttcaaacgaaatttgaaaag
ttctttgaaaagattgacttgaccatgttaaacaggcttctacggttggttctggatcac
aacattgcagattatgttactgcaaagaataatgtggtgttgtcttacaaagatatgagc
cacacaaattcatatggtcttattcgtggacttcagtttgcttcttttgttgtccagtat
tatggacttgttctggatctcttgattcttgggttgactcgtgctagtgagattgctggt
ccaccccagatgccaaatgaattcatcacatactgggacacaaaagttgaaacccggcat
ccaattcgtctgtactctaggtacatcgatagggtgcatatattgttcagattcactcat
gaagaggcacgagaccttattcagcgatatcttactgagcaccctgatccaaacaacgaa
aacatggttggatataacaacaagaaatgctggccaagagatgcaagaatgaggcttatg
aaacatgatgttaatcttgggagaagtgtcttttgggacatgaagaatcgtctgcctaga
agcatcacaactttggaatgggagaacagctttgtctctgtctatagcaaggataatccc
aacctgctttttagcatgtgtggttttgaagttcggatacttcctaaaataagaatgact
caagaagcatttagcaatacaagagatggagtttggaatttgcagaatgaacaaacaaaa
gagcgaactgcagtagctttcttacgggttgatgatgagcacatgaaggtgtttgagaat
cgtgttaggcagattctcatgtcttctgggtcaacaacatttacaaagatagtaaacaaa
tggaatactgccttaataggtcttatgacttacttccgtgaagcaactgtacatacacaa
gagcttctagatctgcttgttaaatgtgaaaataaaattcaaactcgtatcaagattgga
ctgaattcaaaaatgcctagcagattccctcctgtcattttttacacacctaaagaaatt
gggggacttggtatgttatcaatgggtcacatattgattcctcagagtgacctccgatac
agtcagcagactgatgttggtgtaactcactttaggagtggaatgagtcatgaagaggac
cagctgattccaaacctttatcgttacatacagccatgggagagtgagttcatagactca
cagcgcgtttgggcagagtatgccctaaagaggcaggaagctcaggcacaaaataggcgc
ctaacccttgaggatttggaagattcttgggataggggaataccgcgtattaatactttg
tttcagaaggacaggcacactttagcatatgacaaaggatggagagtacgtacagacttt
aagcagtaccaagttttgaagcagaacccattctggtggactcaccaaaggcatgatggc
aaattgtggaacttgaataactatcgaactgatgtcatccaagctctgggaggtgttgag
gggattctggagcataccttgtttaaaggaacatactttccaacttgggagggtctgttt
tgggaaaaggcttctggctttgaggagtcaatgaagtataagaagctcactaatgctcag
agatctggtcttaatcagattcctaaccgtaggtttaccctttggtggtcacctacaatc
aatcgggctaatgtttacgtgggttttcaagtgcaactagatctaactggaattttcatg
catgggaagataccaaccttgaaaatatctttgattcagatcttccgtgcccatttgtgg
caaaaaattcatgagagtgtggttatggatctttgccaagtcttagatcaggagttggat
gctttggaaattgaaactgttcagaaggagacaatccatccgaggaagagttacaagatg
aacagctcttgtgcagatattcttctttttgcagctcatagatggcctatgtcaaagcct
agtcttgtggcagagtccaaggacatgtttgatcaaaaagcaagcaataaatattgggta
gatgtacagctccggtggggagattatgactcacatgatattgagcgttacactcgagcc
aaatttatggattatacaacagataacatgtctatttatccatctcctactggggtgatg
attgggcttgatctggcttacaacttgcattctgcatttggtaactggttccctggatcg
aagccactgcttgcccaggcaatgaataagatcatgaagtcaaatccagctttatatgtt
ttaagggaacggataaggaaaggtttgcagttgtattcttctgagcctactgagccatat
ctttcatcccaaaactatggagagatcttcagcaaccagatcatttggtttgttgatgac
accaatgtgtatcgtgtgacaatccataagacatttgaagggaatctcacaacaaaaccc
attaatggtgccatctttatattcaatccgcgtactggacagttgttcctaaaggtcatt
cacacaagtgtatgggcaggtcaaaagcgtcttggccagcttgccaagtggaaaactgct
gaagaagtagctgcccttgtgcggtctttgcctgttgaagaacaaccaaagcagatcatt
gttactcgaaagggaatgcttgatcctttggaggttcacttactggatttccctaacata
gttatcaagggaagtgagctgcaactaccattccaggcttgcttgaaaattgagaaattt
ggtgatctgattttgaaggctacggagccacaaatggttttattcaacatctatgatgac
tggttgaagagtatctcatcatacactgcattctcccgactcattctgatccttcgtgca
cttcatgtaaacaatgagaaggctaagatgttattgaaacctgacaagacaatcgttact
gagccacatcatatctggccttctctaactgatgatcaatggatgaaggttgaagttgct
ttaagagatctcatactctctgactatgccaaaaagaacaatgtgaacacatcggccctg
acccagtctgagattcgtgacattattcttggagcggagattaccccaccctctcaacag
aggcagcagatagcagagattgagaaacaggcaaaggaagctagccagctgacagctgtg
acaactaggactaccaatgtgcatggtgatgagctcattgtcaccaccacaagtccctac
gagcaagcagcatttgggtccaagacagattggcgtgtcagagccatatcagctacaaat
ctttatcttcgcgtcaatcatatatatgtgaactcagaggacataaaggaaactgggtac
acttatatcatgccaaagaatattttaaagaagttcatctgcatagcggatctacggact
caaattgctggatacttgtatggaataagccctcctgacaatcctcaggttaaggaaatt
cgctgcatagccatgccaccacagtggggtactcatcagcaagttcatcttccatcaaca
cttcctgaacatgatttcttgaatgatctggagcctttgggatggatgcacacacagcca
aatgaacttcctcaattatcgccacaggatgtcacagcccatgctcggattttagagaac
aacaagcattgggatggtgagaagtgcattatcttaacatgcagtttcaccccaggttct
tgctcattaacagcatacaagcttaccccaagtggttatgagtggggacgggttaacaaa
gacactggaagcaatcctcatggttaccttccaactcattatgagaaggtgcagatgctc
ctaagtgatcggttccttggattttatatgattcctgacaatggtccatggaattacaat
ttcatgggagtgaagcatacagttagcatgaaatacggggtgaaacttggaacacctaga
gaatactacaatgaggaccataggccaactcatttcctcgagttcagcaacttggaggaa
ggtgagactgcagaaggagatcgagaggatacatttacctaa
DBGET
integrated database retrieval system
