Durio zibethinus (durian): 111274583
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Entry
111274583 CDS
T05242
Name
(RefSeq) polyadenylate-binding protein 6-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111274583
09123 Folding, sorting and degradation
03018 RNA degradation
111274583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111274583
03041 Spliceosome [BR:
dzi03041
]
111274583
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111274583
mRNA cycle factors
Stress granule specific factors
111274583
Spliceosome [BR:
dzi03041
]
Complex C
Other components
Complex C specific factors
111274583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RBD_DEAH11
RRM_RdRP1_2
MLLE
RRM_MARF1
RRM_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
111274583
NCBI-ProteinID:
XP_022715067
UniProt:
A0A6P5WGW8
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MYSGRRNLCRVMSVQTKYSKSQYTVPHEPHHLTVITKQRNKRAKPCISLLSLSLGLSKRK
NEMASARSPSSSPPSLPLQLPAPTVSGGWWNPLQRVSLYVGDLDPDVTEVDLFNKFSVVS
PVASLRLCRCLRTGKSLRYGYINFFSHSHASKALACLNHTDLKGKPVRIMWSRRDPFLRK
IGLANLFVKNLDPSISSACLEGIFCRFGTILSCKVVEENGKSKGFGFVQFDSEASAMTAL
TALHDTMLEGRKLYVSKFVKKRERTAASEEEKFTNLYVKNLFDGVTEDFLEEVFSRYGKV
CSVVIMKDGNGSSRGFGFVNFQSPDDAKKALEAMNGVQLGKNGSKNLFVGRAQKKAERTK
LLKHKYKDVFNGRFEKLKASNLYVNNLNISIDDRRLQELFGHFGRITSARVMCLENGMSK
GFGFVCFSSPEEAMAALHGLNGTFFEGRFLYVAIAQHKEDRCKELQNYHVQNTPILSSYQ
SSCNAVTPPFHPFYFKYTPCLPLFPLLRQPSLYQHFVANMGIQYPFVPTHEQQNFSYDLI
RHIHPSVSGIRRDWVYRQHPENATKLTGVLLEMNSDVLKRLNSPNSLAVQDTSVQVLKEA
NTRISNDAVTFAIPKSTRCLSY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggtcgaagaaacttatgtcgcgtgatgtccgtacaaacaaaatattccaaa
tcccaatataccgtaccacacgaacctcaccacctcaccgttataacaaaacaaagaaac
aaaagagcaaaaccctgcatctccctcctctctctctctctgggtttaagcaaacgaaaa
aacgaaatggcgtcggcacgatcaccgtcgtcttctcctccgtctctgccactgcaacta
ccggcgccaacagtttctggaggatggtggaatcctctgcagagagtgtcgttgtacgtg
ggtgatttggaccctgatgttacagaggttgacctctttaacaaattctctgtcgtttca
cccgtcgcttctcttcgcctttgccgatgcctccgtaccggaaagtctcttcgttacggt
tacatcaacttcttctctcattctcatgcatctaaagctttagcttgtctaaaccacact
gacctgaagggaaaaccggtgagaataatgtggtctcgcagagaccctttccttagaaag
attggtcttgccaatctttttgtcaagaacctggacccttctataagcagcgcttgcttg
gagggaatcttctgccgttttgggactattctttcttgtaaggttgttgaagaaaatggc
aagagtaaaggatttggatttgtacagtttgattcagaggcatcagctatgactgcatta
accgctctccatgatactatgcttgaagggaggaagttatatgtttccaaatttgtcaag
aagagagagaggacagcagcttctgaagaagagaagttcactaatctatatgtgaaaaat
ctgtttgatggcgtgacagaggatttccttgaagaagtgttttctagatatgggaaggtt
tgcagcgttgtaatcatgaaagatggcaatgggagctcaagagggtttggtttcgtcaac
tttcaatccccagatgatgctaagaaggctctggaagctatgaatggtgtacaactgggt
aaaaatggttcaaagaatttgtttgtgggaagggctcaaaagaaggccgaaaggacaaag
ctattgaaacataagtacaaagatgtgttcaacggccgttttgagaaattgaaggcttca
aatctctatgtgaacaacctcaatatatccattgatgacagaagattacaagagcttttt
ggacactttggacgaataacctcagctagggtgatgtgccttgaaaatgggatgagtaag
ggatttggctttgtgtgcttttcctcccctgaagaagcgatggcagctttacatgggctt
aatggaaccttctttgagggaaggttcttatatgtggcaatagctcagcacaaagaagat
cgctgcaaggaattgcaaaattaccatgtgcaaaacacccccatactgtcctcatatcaa
tctagttgcaatgctgttacccctccgttccacccattttacttcaagtacactccttgc
cttcctcttttccctcttctgcgccagccatccctatatcagcattttgttgcaaacatg
ggcattcagtatccttttgtaccaacacatgagcaacaaaacttctcatatgatcttatt
agacacatccatccaagcgtttctggtatcagaagagattgggtgtatagacagcatcct
gaaaatgcaacgaagctaacaggagtgctgctggagatgaattctgatgtactcaagcgg
cttaattctccaaattccttggctgtgcaagacacgtcagttcaagttctaaaggaggca
aatactaggatcagtaacgatgctgttacttttgccatccccaaatctacccgttgcttg
agctattag
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