Durio zibethinus (durian): 111275060
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Entry
111275060 CDS
T05242
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03022
Basal transcription factors
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111275060
09124 Replication and repair
03420 Nucleotide excision repair
111275060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111275060
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111275060
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111275060
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111275060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
AcylCoA_dehyd_C
Motif
Other DBs
NCBI-GeneID:
111275060
NCBI-ProteinID:
XP_022715896
UniProt:
A0A6P5WKC3
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MPQVKIIAKNFMDMVASLPAIKLDILYHNQFICEAILRSMPPLAKKYVLQMLYIDVPMTF
KSLQEWVLADGSSKHQVAIDRLIQLRVLEVIDRKKETTYKLNPTFQTNLRKHLIYGGILS
REPMPSNVVARLPTLEELDAYAHEQWECFLLQLISSGQAERSSSFSSSMMRIFQRGLLRQ
RDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHTTGEA
YNLNTLADDQEAMIKDLADLGLVKLQQGRRERWFIPTKLATNLSVSLTDSSSRKQGFVVV
ETNFRMYAYSSSKLHCEIFTSVCRVEYQLPNLIVGAITKESLYNAFENGITAEQIITFLQ
QNAHPRVAEKLPSVPENVTDQIRLWETDLNRVEMTPAHFYDEFSSRDIFETASDFARVHG
GLLWEDAKKMQMAVKAEIHMLMREHLRGNK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgaagattatcgcgaagaatttcatggacatggtggcttcattgcctgct
attaagctcgacatactttatcataatcaattcatttgcgaagccattctcaggtcgatg
ccgcctctggcgaagaaatacgtgttacaaatgttatacattgatgttccgatgacattc
aagtcgttgcaggagtgggtgcttgccgatggatcctctaagcaccaagttgcgatcgat
cggttgattcaattaagagtattggaagtaatcgataggaagaaggaaaccacttacaag
ttaaaccccacatttcagactaatctccggaaacatttgatatatggtgggattttgtct
agagaaccaatgccttcaaatgttgttgctagactcccaaccttggaggaacttgatgct
tatgcacatgagcaatgggagtgtttcttgctgcaacttataagttcaggacaagctgaa
agatcgtcaagcttcagctcttccatgatgagaatttttcagcgtggtctgctacgtcag
agagacaaagaagctccgaggttaactgagagtggtttccagttcttgctgatggataca
aacgctcagctttggtatattatcagagaatatatctccaattcagaggagcaaggtgta
gaccaagctgatttaattgcatttttgctagaacttagttttcataccactggtgaggca
tataatttaaatactctagcggatgaccaggaggctatgatcaaggaccttgcagacttg
ggattggtcaaacttcagcagggaaggagagagaggtggtttatacctactaaattagcc
acaaatctttcagtgagcttaacagattcatcatcaaggaaacagggatttgttgttgtg
gaaacaaactttaggatgtatgcatactcgtcatctaagttacactgtgaaatttttacg
tctgtttgtagggtagagtatcaacttccaaacctcatagttggcgcaataacaaaagaa
agcctgtacaatgcttttgaaaatggaattacagctgagcagataattacgttcctccag
cagaatgcacatcctcgagttgctgagaaactaccatctgtacccgaaaatgtcacagat
cagataagattgtgggaaactgatttaaatagagttgagatgacccctgctcatttttat
gatgaattttcttcgagggacatctttgagactgcttctgactttgcccgagtgcatggt
ggtttactatgggaggatgctaaaaaaatgcaaatggctgtcaaggcagagattcatatg
cttatgcgagagcatcttcgcggaaacaagtag
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