Durio zibethinus (durian): 111276032
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Entry
111276032 CDS
T05242
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111276032
03015 mRNA surveillance pathway
111276032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111276032
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111276032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_10
RRM_3
RRM_ACIN1
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
111276032
NCBI-ProteinID:
XP_022717474
UniProt:
A0A6P5WNC5
LinkDB
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Position
Unknown
AA seq
426 aa
AA seq
DB search
MAKPTRVRRSPSISGSGSSSRSRSRSKSRSRSYSGSDSKSSSRSQSLSRSRSASPSSSRS
RSRSISSSSPSRSASSRSRSPPQRRSLADASRRGRSPPPQSKKASPAPSDFRKTSPIRES
LVLYVDSLSRNVNEGHLREIFSNFGEVVNVDLAMDRALNLPRGYGYVEFKTRADAEKALL
YMDGAQIDGNVVRAKFTLPPRPKVSSPPKPIASATKRDFPKSDNANADIERDEPKRPRES
SPQRKILPSPRRRSPVGRRGGSPRRPPESPRRRHDSPVRRRGETPPRRRPASPPRGRSPS
SPPRRLRSPARTSPRRLRGSPIRRRSPLPRRRSPPRRARSPPRRSPFSRRRSRSPFRRPA
RSRSRSISPRRGRGPAARRGRSSSYSRSPSPRKVARRISRSRSPRRPLRGRISSNSGSSS
SPPRKP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgacgagagttcgtcgctcaccttctatctctggctccggttcctcttcc
cgttctcggtcacggtccaaatctcgttcccgctcttactccggctcagactccaagtcc
agctcccgctctcagtctttgtcccgctccagatctgcttccccttccagctctcgctct
cggtccagatctatctcctcttcctctccttctcgtagcgcgagttctcgaagtcgcagc
cctcctcagcgtcgaagtctggctgatgcatctaggcgaggtcgttcccctccaccacaa
tctaaaaaagcatctccagctccaagtgatttcaggaagacttctcccatccgtgagtcc
ctagttctttatgttgactcactgagcaggaatgtcaatgaaggccatctaagagagata
tttagtaattttggtgaagttgtaaacgtcgatctggcaatggaccgtgctcttaatctt
ccaagaggatatggctatgttgaattcaagacaagagcagatgctgaaaaagctctactg
tacatggatggcgcccagattgatggcaatgttgtaagagcgaagtttacacttcctcca
cgaccaaaagtttcttcaccgccaaagccaattgcttctgctactaaaagagattttcca
aaatctgataatgccaatgctgatattgagagggatgagccaaaacgaccaagggaatct
tctcctcaacggaaaatcctgccctcaccacgaaggagatcccctgtgggtcgaagaggt
ggatctcctagacgaccaccagagtctccacgccggcgacatgattctccggttcgtcgt
cgtggtgaaacacctccaaggcgccggcctgcctctccacctagaggtcgttctccttca
tctcctccaaggcgacttagatctccagcaaggacctctcctcgtaggctgcgtggtagt
ccaatccgaaggcgttctcctcttccaaggcgccgttcacctcctagacgagcccgtagt
cctccaagaaggtctcccttcagtcgtagacggagccgttctccatttcgtagacctgct
cgttctcgttcaaggtcaatctcacctcggagaggcagaggaccagcagcaagacggggg
aggtcatcatcgtattccagatcacccagtccgcggaaggtggcaaggaggatttcaagg
agtcgcagtcctagaaggccattgagaggaaggattagcagcaacagcggcagcagtagt
tcgcctcctcgtaagccatag
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