Durio zibethinus (durian): 111277233
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Entry
111277233 CDS
T05242
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111277233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111277233
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111277233
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111277233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
111277233
NCBI-ProteinID:
XP_022719256
UniProt:
A0A6P5WUS4
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDADNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDDFSDVDELYNSLPLDKVDS
LEDLVAIGPLSKAAPILGLKTSLASSASQVTGSSPQEHVEDTASQDSNSDIARTPPSKSS
AINSSPAGTPTGSHAAPALVNLPPHNLSGASTPSVVLLGSNSARGILENTGTTNPPSPVN
LPNATKEEDITSFPGRRPSPSHADTGVRGIGRGGLSSQISSSIPLVSGSVASGNGALGVV
PSVSDMAKRNILGADERLGNSSMGQSLVSPLSNRMILSQTAKANDGSASVDSSNPNESAG
LPGRAFSPSIVSGMQWRPGSSFQNQNELGQFRGRTEIAPDIREKFLQRLQQVQQQGHSNL
LSMPPIAGGNHKQFSSQQQNPFMQQFNSQSSSISIQPGLGLGGQAPGLNSVTSASIQQQP
NSIHQQSSQQALATSVPKDADVGNAKVEEQPLQNLPDNSSSEAIPTSGLAKNLMNEDDMK
APYAIDSAAAVSGSLTEPAQVIGDIDLSPGQPLQSNQSSSGLGVIGRRSVSDLGAIGDSL
SGSTNYGGMHDQIYNLQMLDAAYYKIPQPKDSERARTYTPKHPATTPASYPQVQAPIVNN
PAFLERLSIDGYGTGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEP
KIATDEFEQGTYVYFDFHIANDDHQHGWCQRIKTEFTFEYNHLEDELMV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtcgcaagcttcaaggagagatcgatcgtgttctgaagaaagttcaagaa
ggcgtcgatgtcttcgatagcatctggaacaaggtttatgatgctgataatgcgaatcag
aaggaaaagtttgaggcagacttgaagaaggaaatcaagaagctacaaaggtatagggac
cagatcaagacatggattcagtcgagtgagatcaaggataagaaagttagtgcctcttat
gagcaggccttggtggatgctcggaaacaaattgagcgtgaaatggaaagatttaagatc
tgtgagaaggagactaagacaaaagcattctctaaagaaggcttgggccaacaacccaaa
actgatccaaaggagaaggctaaatcagagacaagggattggttgaacaatgtggttgga
gagttagaatcccagattgatagttttgaagctgagattgaggggctttctgtgaagaaa
ggaaagacaagaccgcctagactgacacacttggagacgtcaattacacggcacaaagct
catataatgaagttagaattgattttgagactattggacaatgatgaattgagtccagag
caggtcaatgatgtgaaagacttcttggatgattatgtggaacgtaatcaggaggacttt
gatgattttagtgatgttgatgagctctacaactcactacctttggacaaggtggattct
cttgaagatctggttgcaataggccctctttccaaggctgcaccaattcttggcttgaag
acatctttggcatcatcagcatctcaagtgactggtagttccccccaggagcatgttgaa
gatactgcttcccaggatagtaattctgatatagcaaggactccaccttcaaaaagcagt
gcaattaattcttctcctgcaggaacacctactgggagtcatgcagcccctgctctggtg
aatcttccacctcataatttgtctggtgcttcaactccttcggttgttcttctaggctca
aattctgctcgaggtatcttggaaaacacaggcactaccaatcctccatctcctgtaaat
ttgccaaatgctacaaaagaagaagatatcacaagcttccctggccgtaggccatctcca
tctcatgctgatactggagtacgaggcattggtagaggaggcctctccagtcagatttca
tctagtattccccttgtttctggaagtgtggcttctggcaatggagcccttggtgttgtc
ccttcagtctctgacatggcaaaaagaaatattttgggggctgatgagagacttgggaat
agtagcatggggcaatctttggtatcccctcttagtaacagaatgatcttgtctcagact
gccaaggctaatgatggaagtgcatctgttgattctagtaatcctaatgagtctgctgga
ctacctggcagagctttttccccttcaatagtttctggtatgcagtggaggcctggaagt
tcctttcagaatcaaaatgagctggggcagtttcgtggaagaactgagatagcacctgat
attagggaaaaatttttgcaaaggctccagcaagtgcagcaacagggccatagcaacctg
ctaagcatgcctcctatcgctggaggaaatcataagcagttttcttcacaacaacaaaac
ccattcatgcagcagtttaattctcaaagctcatctatctctatccaacctggtctggga
cttggtggccaagcaccaggtcttaacagtgttacatctgccagcatacagcagcaaccg
aactccatccaccagcagtctagtcagcaggcattggcaacaagtgttccaaaggatgct
gatgttggcaatgcaaaagttgaggaacaaccactacagaatttgcctgataattcaagt
tctgaagctattccaacttctgggcttgccaagaatctcatgaatgaagatgatatgaaa
gctccatacgcaattgattctgctgctgctgtatcaggctctttgacagaacctgctcaa
gttattggggatattgatctttctcctggacaacccttacaatctaatcagtcttctagt
ggtcttggtgttattggccggagaagtgtttctgatcttggtgccattggtgacagcctc
agtgggtcaacaaattatggaggaatgcatgatcaaatatacaatttgcagatgcttgat
gctgcatattacaaaattccccaacctaaagactcagaacgtgcaaggacctacactcca
aagcaccctgcgaccacacctgctagctaccctcaagttcaggcacccatcgtgaataat
cctgccttcttggaacgcttaagcattgatggatatggcaccggcactgatacactgttc
tttgcattttattatcaacagaacacttatcaacagtatctggctgcaaaggagctgaag
aagcaatcttggagatatcacagaaaatacaacacatggtttcagcgacacgaggagcca
aaaattgccactgatgaatttgaacaaggaacctatgtttacttcgattttcatatagca
aatgatgaccaccaacatggatggtgtcagagaatcaagactgagttcacttttgagtat
aaccatcttgaagatgaacttatggtataa
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