Durio zibethinus (durian): 111277532
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Entry
111277532 CDS
T05242
Name
(RefSeq) uncharacterized protein LOC111277532
KO
K07573
exosome complex component CSL4
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111277532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111277532
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111277532
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111277532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ammonium_transp
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
111277532
NCBI-ProteinID:
XP_022719694
UniProt:
A0A6P5WUB5
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MEEAEMVTPGEVLGRAIELKAGKGAYVEPHNKTIYASLTGFRRILSPPPDSPDQRPTVEI
TGHKAHGPVPEPGSVVIARVTKVMARTASADIMCVGPKSVREKFTGIIRQQDVRATEIDK
VDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAGAAMVPISWTEMQCPL
TGQIEQRKVAKVGSNYVSQTLPSFFFSSNSKSLGGDGEWGNGAISQAFLVRIVLLKALTF
SFHAVNYILVENLKYVLFVSVILFKSVFGIDVQNMPCSSSSSFLLLLQPLTFPSTPSPSP
TLLFYQNPIHNPFKTSLRKPFNNSKKLYLSKPQTIPFALTESDSPKSLEPNPQTLLQEVS
DSFDLPSDYFSQLPTDLRLDLNDAAFDLSNGPVIDECGLELGETLLKLSRAWELADTSTS
HTLASKLPLLESSLTDSGKSAFGRRLVAAGRRFQATGQYGQGELQKIAKAMNAAGRLLSA
SSVSATTDEQPKMETRTFKFGELQVEVTSEKANIGAAIGFVFGILSWQIAQGIQSIPESS
LEYANDNALLLAKSLRGALLVLFYSSTILSVSTTIGLVLLGRQLNSTMDSLSCAASDLVP
LLSSSNNATALASFLCTRFSTISNQLSDTTHAIDNTFLLFSAYLVFAMQLGFAMLCAGSV
RAKNTMNIMLTNVLDAAAGALSYYLFGFAFAFGTPSNGFVGRHFFGLKSYPSPSSDYSFF
LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSGYGWASATRSDN
LLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRAGRSVALRGHSASLVVLGSF
LLWFGWYGFNPGSFLTIMKGYGSGGGYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLV
GHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAWVLIGFNMLASKLKYDDPLEA
AQLHGGCGAWGLLFTGLFATKAYVNEVYPGRPGRPYGLFMGGGGKLFAAQIIQILVITGW
VTATMGPLFYVLHKMKLLRISREDETAGMDFTRHGGFAYVYHDEEDLSLRPGFMMTKIGP
TNVSPSSQGEKSPSNV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagagatggtaacgccaggagaagtgttgggaagagccattgagcttaaa
gcagggaaaggagcctacgttgagcctcacaacaagaccatctatgcttcccttactggc
ttccgccgtatcctatcccctcctcctgactctcctgaccagaggccaactgtggaaata
actggtcacaaagcccatggtcctgttccagagcctggttctgttgtcattgcccgagtt
actaaggtgatggctaggacagcatcagctgatattatgtgtgttggtccaaagtctgtc
agagaaaaattcaccggtataattaggcaacaggatgttagagcaactgaaattgacaaa
gtggatatgcacttgtcatttcgtcctggtgatattgtcagagctgtggtgctgtctctt
ggagatgcacgggcttactacctatcaactgctaagaatgaactgggtgttgtgtctgcc
gagagctcagctggcgcagcaatggttccaataagttggacggaaatgcagtgcccattg
actggccaaatcgagcaaaggaaggttgcaaaggttggaagcaattatgtatcacaaaca
ctgccctcattttttttttcctcaaattctaaaagtttagggggggacggggagtgggga
aatggggcaatttcacaggcttttttagttagaatcgttctcttgaaagctttaactttc
tctttccatgctgtaaactatatactggttgagaatttgaaatatgttttgtttgtttca
gttattctttttaaaagtgtttttggaatagatgtccaaaacatgccttgttcttcttct
tcttcgtttctacttcttcttcaacctctcacctttccctcaactccatccccctctcct
acccttctgttttaccaaaatcccatccataaccctttcaaaacttctctaagaaagccc
tttaataactccaaaaagctctacctctcaaagcctcaaactatcccatttgctctcaca
gaatcagactcccctaaatccctggaacccaaccctcaaacccttctccaagaagtttct
gacagctttgatcttccatcagattacttttcccagttaccaacagatcttcgtttggat
ttaaatgatgcagcttttgatctatcaaatggacctgtgattgatgagtgtggtctagag
ttgggagaaacattattaaaactctctagagcttgggaactagctgatacttcaacttcc
catacattggcaagcaaactccctttgttggagagctctttgactgacagtggaaaatca
gcatttggaaggcgtttggtagctgctggcaggaggttccaggcaacgggacagtatggt
caaggagaactacaaaagattgcgaaagcaatgaatgcagctggaagacttctgtctgca
agttcagtatctgcgacaactgatgaacaaccaaaaatggaaactaggacgtttaagttt
ggagaacttcaggttgaggtaacatctgagaaagctaacattggagctgcaataggtttt
gttttcgggattctttcatggcaaatagctcagggcatacaaagcattccagagagttca
ttagaatatgcaaatgacaatgctctgcttctagctaagtctctaaggggagcgctactt
gttcttttctattcatccacaatcttgtcagtttcaaccacaataggacttgtcttactc
ggaagacaactaaattccaccatggattccctcagttgcgcagcctccgacctcgtcccc
ctcctctcctcctccaacaatgcaacagccctcgcctccttcctttgcacccgtttttca
accatctccaaccaactctcagacaccactcacgccatagacaacacttttctcctcttc
tccgcctacctagtcttcgccatgcaactgggctttgccatgctctgtgctggatcagtc
agagctaagaacaccatgaacatcatgttgactaacgtccttgacgcagcagccggtgct
ctgtcttattacctctttggttttgcctttgcctttggtaccccttctaatggtttcgtt
ggtcgccacttctttgggcttaaatcttacccttcaccttccagtgattatagttttttt
ctttatcaatgggcttttgccatagctgctgctgggattactagtggctccatagccgaa
cgaacccaattcgtagcttaccttatttactcttcctttttaaccggctttgtttaccca
atcgtttcacattggttttggtctggatatgggtgggccagcgccacccgatcggataac
cttttattcgggtcgggtgtgattgactttgctggttcaggtgtcgttcacatggttggt
ggcatcgccggtttatggggtgcgttgatcgagggcccaagaatcggcaggtttgatcgg
gcaggtcggtctgtggcgttacgtgggcatagtgcctcgttagtagtgctcgggtcgttt
cttctgtggttcgggtggtacggatttaacccggggtcctttttgaccatcatgaaaggg
tatggtagtggtgggggttattatggacaatggagcgcaatcggtaggacagctgtcaca
acaacattggctgggtgcacagctgctcttactaccttgttcagcaagagactattagtt
ggtcattggaacgtaattgacgtttgtaatggtttgttaggaggctttgctgcaatcacc
tcagggtgttcagtggtagaaccatgggctgcaatcatatgtggcttcgtagcagcatgg
gttctaattggattcaacatgcttgcatccaaactcaaatatgatgacccactagaggca
gcccaattacatgggggctgcggcgcgtggggtttactcttcacgggattgttcgccacc
aaggcatacgttaacgaggtctatccagggcggccgggaaggccatacgggttattcatg
ggtggcggagggaagctatttgcggctcagatcattcagattttggtcataacaggatgg
gtcacggccacaatggggccactcttttatgtgctgcataagatgaagttgttaaggatt
tctagagaagatgaaactgctgggatggacttcacaaggcatgggggatttgcttatgtg
tatcatgatgaagaggatctttcactgaggccaggattcatgatgacaaaaatcggacct
acaaatgtaagtccctcatcacagggtgaaaaatcaccctcaaatgtatga
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integrated database retrieval system
