Durio zibethinus (durian): 111277758
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Entry
111277758 CDS
T05242
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
dzi
Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111277758
Transcription machinery [BR:
dzi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111277758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
111277758
NCBI-ProteinID:
XP_022719913
UniProt:
A0A6P5WVQ7
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MMATAAVIGLSTGKRLLSSSFSYSDIIEKHSYASDYGSSQYQTSYTKSLIVAKKSSNCSQ
SLPSSNRPTQSIKAFKEHVDTTSGISTAEPWFRGSNDLEEENHDLDYSVEALLLLQKSML
EKQWTLSFERTVFTESPCRKTYKKIPVTCSGVSARQRRFNTKRKILNQNKSMIQPNAKQL
RSLISPELLQSRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEKQRLRLKERLGCEPS
DEQLAASLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAKRYDNMGAEMSDLIQGGLI
GLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPMHLHERLGLIRNAKNRL
EGKRITPTIDRIAESLNMSQTKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNH
VENIPWHGVDEWALKDEVNRLITVTLGERERQIIRLYYGLDEESLTWEDISKRIGLSRER
VRQVGLVALEKLKHAARKKKLEAMLVKH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacagctgctgtgattggtcttagcactggaaagagactcttgagttcttcc
ttttcttattctgatatcatagagaagcactcatatgccagtgattacggatcttcgcag
tatcaaacttcttacacaaaaagtttaatagttgcaaaaaaatcatcaaattgtagtcaa
agtcttccatcatccaatcggcctactcagtcaattaaagcttttaaagagcatgtggat
actacctccggtatttcaactgcagagccctggtttcggggatccaatgacttagaagaa
gaaaaccatgatcttgactactctgtggaggctcttcttttgcttcagaagtctatgctg
gaaaagcaatggactctttcttttgagaggacagtgttcactgaatcaccatgtagaaaa
acctacaagaaaatacctgttacttgttctggggtgtctgctcggcaacggagattcaat
accaagaggaaaattctgaatcaaaataaatcaatgatacaacctaatgctaagcagcta
agatccttgatcagtccagagctgcttcaaagtcgtttgaagggttatgtgaagggtgta
gtaagtgaagatttgctcagccatgcagaagttgtgcgcttgtcaaagaaaattaaagct
ggactttccttggagaagcagagattaagattgaaggagagattggggtgtgagccatct
gatgaacaacttgcagcttccttgaagatttctcgtgctgagttacggtcaaagttaatt
gaatgttctttggcaagagaaaaactggcaatgagcaatgttcgtttggttatgtcgatt
gctaaaagatatgataacatgggtgctgaaatgtctgatcttattcagggtggtttgatt
ggacttttgcgtggcattgaaaaatttgattcttcaaagggatataaaatttcaacttat
gtgtactggtggatacgtcagggtgtttctagagcattagttgagaactcaagaacatta
agattgccaatgcatttgcatgaaagattaggactaatccgaaatgcaaaaaatagactg
gaagggaaaagaataacaccaactattgataggattgccgaaagtctgaacatgtctcag
acgaaagttaggaatgctacggaggcagtcagtaaggtcttctcccttgacagggatgca
ttcccctctttgaatggtcttcccggggagactcatcatagttacattgcagataaccat
gtagaaaacattccatggcatggagtagatgagtgggctcttaaggatgaagtgaacaga
ctcatcactgtaactcttggagaacgagaaaggcagattatacgcctttattatggtcta
gatgaggaaagtcttacatgggaggacatcagtaaacgcataggtttgtccagagaaaga
gttaggcaagttggacttgtcgcactagagaaactaaaacacgcggcaaggaagaaaaaa
ttggaggctatgctagtgaaacattga
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