KEGG   Durio zibethinus (durian): 111277874
Entry
111277874         CDS       T05242                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03030  DNA replication
dzi03410  Base excision repair
dzi03420  Nucleotide excision repair
dzi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111277874
   03410 Base excision repair
    111277874
   03420 Nucleotide excision repair
    111277874
   03430 Mismatch repair
    111277874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dzi03032]
    111277874
   03036 Chromosome and associated proteins [BR:dzi03036]
    111277874
   03400 DNA repair and recombination proteins [BR:dzi03400]
    111277874
DNA replication proteins [BR:dzi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111277874
  DNA Replication Termination Factors
   ELG1-RFC complex
    111277874
Chromosome and associated proteins [BR:dzi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111277874
DNA repair and recombination proteins [BR:dzi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111277874
  Check point factors
   HRAD17(Rad24)-RFC complex
    111277874
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 AAA_16 Mg_chelatase Viral_helicase1 RuvB_N AAA_5 AAA_11 nSTAND3 AAA_19 AAA_24 AAA_28 AAA_assoc_2 cobW AAA_30 MeaB bpMoxR AAA_18 AAA_25 KTI12 AAA_3 RNA_helicase NTPase_1 IstB_IS21 T2SSE SLFN-g3_helicase ABC_tran DO-GTPase1
Other DBs
NCBI-GeneID: 111277874
NCBI-ProteinID: XP_022720041
UniProt: A0A6P5WX28
LinkDB
Position
Unknown
AA seq 332 aa
MASSSSFAAGAYDVPWVEKYRPNKVSEIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLRPGRHKIVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL
IVVVDAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFSFVNQENVFKVCDQPHPLH
VKNMVRHVLEGKFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQLCGLLAKFSLVRETAKAA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgtcctcttcatcattcgccgccggcgcttatgacgtgccgtgggttgaaaaatac
cggccaaacaaagtctcggagatcgtcggcaacgaagacgctgtgtctcgactccaagtc
atagctcgcgatggcaacatgcccaacctcatcttatccggtcctcctggaactggtaaa
acaactagtattcttgctcttgcacatgagcttttggggccaaactataaggaggctgtt
ttggagcttaatgcatcggatgataggggtatagatgttgtccgaaacaaaattaaaatg
tttgctcaaaagaaagtaactttacgtcctgggcggcacaagatagttatcctggatgaa
gctgacagcatgacatccggtgcacaacaagccttgaggaggacaatggaaatatattca
aactctacacgttttgctcttgcttgcaatacttcgtcaaaaatcattgagcctattcag
agcagatgtgccctcgtccgattttcaaggttatctgatcaagagattctaggccgactc
atagtggtggtagatgcagaaaaggttccatatgttccagaaggtcttgaagccatcatt
ttcactgctgatggtgatatgaggcaggcattgaacaacttgcaggctacttacagtgga
ttcagttttgtgaaccaagaaaatgttttcaaggtttgtgatcagcctcatccattgcat
gtgaagaacatggtccgtcatgtacttgaagggaaatttgatgatgcttgtttgggtctg
aagcaactctatgatttgggctattctcctactgatataatcactacacttttcagaata
ataaaaaattatgatatggctgagtacttgaaactggaattcatgaaggaaaccgggttt
gcacatatgagaatctgtgatggagttggttcatatcttcagttgtgtggtcttctggct
aagttttctttagttcgtgaaactgctaaagcagcataa

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