Durio zibethinus (durian): 111278815
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Entry
111278815 CDS
T05242
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111278815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111278815
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111278815
Complex C
U5 SnRNP specific factors
111278815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111278815
NCBI-ProteinID:
XP_022721206
UniProt:
A0A6P5X093
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MWNNNNNGSQIVPPGTGGSTIPPPPAAQPSYTVLAPQTTPQEVEAKLEEKARKWMQLNSK
RYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFIPHAVYKLL
ENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKR
MRFPPFDDEEPPLDYADNLLDVDPLEPIQLEMDEEEDSAVYAWFYDHKPLVKTKLINGPS
YRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYR
DMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIKTED
PDLPAFYYDPLIHPITTTNKERREKKIYDDEDEDDFVLPEGVEPLLNDTQLYTDTTAAGI
SLLFAPRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHR
PPKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYTF
SHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLR
GIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIK
QNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIR
RGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKF
SPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIK
RHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKP
ADSEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLD
HNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIA
GPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNN
ENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDN
PNLLFSMSGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFE
NRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKI
GLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEE
DQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINT
LFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGV
EGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPT
INRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQEL
DALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWPMSKPSLVAESKDMFDQKASNKYW
IDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPG
SKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVD
DTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKT
AEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEK
FGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTII
TEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQ
QRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISAT
NLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKE
IRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDVTAHARILE
NNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQM
LLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNLE
EGDTAEGDREDTFT
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacaacaataacggctctcagattgtgccaccggggacggggggatccacc
atcccgccgcctccagctgcgcagccttcgtacacggtgctggctccacagacgacgcca
caggaggtggaggcgaagctagaggagaaggctcggaaatggatgcagcttaactctaag
cgatatggagataaaaggaagtttggttttgttgagacgcagaaggaggacatgcctcct
gagcacgtcaggaagattatcagagaccatggggacatgtcttcaaaaaaatatcgccat
gataaacgtgtgtatcttggggcccttaaattcattccacatgcagtttacaagctcctc
gagaatatgccaatgccttgggaacaggttcgtgatgtgaaggtcttataccatattaca
ggagcgatcacatttgtgaatgaaataccgtgggttgttgaaccaatttatttagcacag
tggggtacaatgtggatcatgatgcgaagggagaaaagagatcgtcgtcatttcaagaga
atgcggtttccaccttttgatgatgaggaacctccattagactatgctgataatctgtta
gatgttgatcctctagagccaattcaattggagatggatgaagaagaagattctgctgta
tatgcttggttttatgaccataagcctcttgtaaaaacaaagcttatcaatggtccgagt
tacaggaaatggcatctctctcttccaattatggcaactttgcaccggcttgctggacag
ctgctttctgatttgattgaccgtaattatttctacttgtttgacatggagtcattcttc
acagctaaagcattaaacatgtgcatacctggtggtcctaagtttgagccattataccgt
gatatggagaaaggggatgaggactggaacgaatttaatgacataaacaaactcattatc
cggtcacctcttaggacagagtaccgaattgctttccctcatctttataacaataggccc
aggaaagtaaagctttgtgtgtatcacacacccatggtcatgtatattaaaacagaagac
cctgatttaccggcattctattatgatcctttgatacaccccataactaccacaaacaag
gagcgacgagagaagaagatttacgatgatgaggatgaagatgattttgtcttgccagaa
ggtgtggaacctttgctgaatgacacgcagctttacactgacactactgctgctgggatt
tctcttttatttgctccacgcccttttaatatgagatctggtcggatgcgacgtgctgaa
gatataccacttgtgtcagagtggtacaaggagcactgtcctccatcttatcctgttaaa
gtgcgggttagttatcagaaactgttgaaatgctttgtgctgaatgagctgcatcataga
ccacctaaggctcagaagaagaagcacttgtttcggtctcttcaggcaactaagtttttt
caaacaacagaacttgattgggttgaagcaggtcttcaagtttgcaagcaagggtataac
atgctgaacctgttgatacataggaaaaatttaaactaccttcacctggattacaacttc
aacttgaagcctgtgaagacactcaccacaaaagagcgcaagaagtcacgttttggtaat
gcttttcatctttgtcgtgagatcctgcggctaacaaagcttgtagttgatgccaatgtc
cagtttcgacttggcaatgttgatgcctttcaattggccgatggcctgcagtatacattt
tcccatgttggccagttgactgggatgtatcgttacaagtaccggctcatgagacagatt
aggatgtgcaaagacttgaagcacttaatttactatcgcttcaatactgggccagtaggg
aaaggacctggatgtggattttgggcacccatgtggagagtatggctgtttttccttcgt
ggcatcgtgcctcttctggaaaggtggttaggaaatctgcttgcacgtcagtttgaaggg
cgtcattcaaaaggagtggccaagactgttaccaaacaacgtgttgagagccactttgat
ctggaacttcgagctgctgttatgcatgatgttcttgatgccatgccagagggcattaag
caaaataaagctagaacaatattgcagcatctcagtgaggcatggcgctgttggaaggca
aacatcccatggaaggttccaggtttgccagttcccattgagaatatgatccttagatat
gtcaagtcaaaagctgactggtggacaaatgttgctcattacaatcgtgaacgtatcaga
aggggtgcaactgttgataagactgtctgcaggaaaaacttaggcagattgacacgcctc
tggctgaaagctgagcaagaacgacagcacaattatttgaaagatgggccatatgttact
ccagaagaagcagttgccatttatactacaactgtgcattggttagagtctagaaaattc
tctcccattccatttcctcctttgtcttacaagcatgatacaaagctacttatccttgca
ctggagaggttgaaggaatcttacagtgtagctgtgagattaaaccaactccaaagagaa
gaattgggtctaattgaacaagcttatgataatcctcatgaggccttatcaaggatcaaa
cgccacctgcttacccagcgtgccttcaaagaagttggtatagagttcatggatttgtac
agctatttgattcctgtctatgaaattgagccccttgagaagattacagatgcttatctt
gaccaatacctatggtatgaaggagacaagcgccacctgtttcctaattggattaagcct
gcagattcagagccacccccgcttttggtttacaaatggtgtcaaggtataaacaatttg
caagggatatgggacacaagtgaggggcagtgtgtggtgatgcttcaaacaaaatttgag
aagttttttgagaagattgacttgacaatgttaaacaggcttctacgtttggttctcgat
cacaacattgcagattatgttactgcaaagaataatgtggtgttgtcttacaaagatatg
agccacacaaattcatatggtcttatacgtggtcttcagtttgcttcttttgttgtccag
tattatggacttgttctggatctcttgcttcttggattgactcgtgctagtgagattgct
ggtccaccccagatgccgaatgaattcatcacatattgggatacaaaagttgaaacccgg
catccaattcgtctgtactctaggtacattgatagggtgcatatattgttccgattcact
cacgaagaggcacgcgaccttatccagcgatatctgactgagcaccctgatccgaacaat
gaaaacatggttggatataacaacaagaaatgctggcccagagatgcaagaatgagactt
atgaaacatgatgttaatcttgggagaagtgtcttttgggacatgaagaatcgtctgcct
agaagcatcacaactttggaatgggagaacagctttgtttctgtctatagcaaggataat
cccaacctgctttttagcatgtctgggtttgaagttcggatacttcctaaaataagaatg
actcaagaagcatttagcaatacaagggatggagtttggaatttgcagaatgaacagacg
aaagagcgaactgcagttgctttcctacgggttgatgatgaacacatgaaggtatttgag
aatcgtgttaggcagattctcatgtcatctggttcaacaacatttacaaagatagtcaac
aaatggaatactgccttaataggtcttatgacttacttccgtgaagcaactgtgcataca
caagagcttctagatttacttgtgaaatgtgaaaataaaattcaaacccgtatcaagatt
ggattaaattcaaaaatgccaagccgattccctcctgtcattttttacactcctaaagaa
attggaggacttggcatgttatcaatgggtcacatattgattccacagagtgacctccga
tacagtcagcagactgatgttggtgtaactcactttaggagtggaatgagtcatgaagag
gaccagctgattccgaacctttatcgttacatacagccatgggagagtgagttcatagat
tcacagcgtgtttgggctgagtatgcactgaagaggcaggaagctcaggcacaaaatagg
cgcctaacccttgaggatttggaagattcatgggataggggaataccgcgtataaatact
ttgtttcagaaggacaggcacacattagcatatgacaaaggatggagagtacgtacagac
tttaagcaataccaagttttgaaacagaacccattctggtggactcaccaaaggcatgat
ggcaaattgtggaacttgaacaattatcgaactgatgtcatccaagctctgggaggagtt
gagggaattctagaacataccctgtttaaaggaacatactttccaacttgggagggtctg
ttttgggaaaaggcttctggatttgaggagtcaatgaagtataagaagctcactaatgct
cagagatctggtcttaaccaaattcctaaccgtaggtttactctttggtggtcacctaca
attaatcgggctaatgtttacgtgggttttcaagtgcaattagatctaactggaattttc
atgcacggaaagataccaaccttgaaaatatctttaattcagatcttccgtgcccatttg
tggcaaaaaattcatgagagtgtggttatggatctttgtcaagtcttagatcaggagttg
gatgctttggaaattgaaactgttcagaaggagacaatccatccaaggaagagttacaag
atgaacagctcttgtgcagatgttctcctctttgcagctcatagatggcctatgtcaaag
cctagtcttgtggcagagtccaaggacatgtttgatcaaaaagcaagcaataaatattgg
atagatgtacaactccggtggggagattatgactcacacgatattgagcgttacacacga
gccaaatttatggattatacaacagacaacatgtctatttatccgtcacctactggggtg
atgattggcctagatctggcttacaacttgcattctgcatttggtaactggttccctgga
tcaaagccactgcttgctcaggcaatgaataagatcatgaagtcaaatccagctttatat
gttttaagggagcggataaggaaaggtttgcagttgtattcttctgagcctactgagcca
tatctttcatcccaaaactatggggagatcttcagcaaccagatcatttggtttgttgat
gacaccaatgtgtatcgtgtgacaatccataagacatttgaagggaatctcacaacaaaa
cccattaatggtgccatcttcatattcaatccacgtactggacagttgttcctaaaggtc
attcacacaagtgtgtgggcaggtcaaaagcgtcttggtcagcttgccaagtggaaaact
gctgaagaagttgctgctcttgtgcggtctttgcctgttgaagaacaaccaaagcagatc
attgttactcgaaagggaatgcttgatcctctggaggttcacttactggatttccctaac
atagttatcaagggaagtgagctgcaactcccattccaggcttgcttgaaaattgagaaa
tttggtgatctgattctgaaggctacggagcctcaaatggttttgttcaacatctatgat
gactggttgaagagtatctcatcatacactgcattctcccggctcattctgatccttcgt
gcacttcatgtcaacaatgagaaggcaaagatgttattgaaacctgacaagacaatcatt
acggagccacaccatatctggccttctctaactgatgatcaatggatgaaggttgaagtt
gctttaagagatctcatactctctgactatgccaaaaagaacaatgtgaacacatcagcc
ctgacacagtctgagattcgcgacattattcttggagctgagattactccaccctctcaa
cagaggcagcagatagcggagattgagaaacaggcaaaggaggcaagccagctgacagct
gtgacaactaggactactaatgtgcatggtgatgagctcattgtcaccaccacaagtccc
tacgagcaagcagcatttggttccaagacagattggcgtgttagagcaatatcagctaca
aatctctatcttcgagtaaatcatatatatgtgaactcagaggacataaaggaaactggg
tacacttatatcatgccaaagaacattttaaagaagttcatctgcatagcagatctccga
actcaaattgctggatacttgtatggaataagccctcctgacaatcctcaggttaaggaa
attcgctgcattgccatgccaccacagtggggtactcatcagcaagttcatcttccatca
gctcttcctgaacatgatttcttgaatgatctggagcctttgggatggatgcacacacag
ccaaatgagcttcctcaattatcgccacaggatgtcacagcccatgctcggattttagag
aacaacaagcagtgggatggagagaagtgcattatcttaacatgcagttttactccaggt
tcttgctcattaacagcatacaagcttactcctagtggttacgaatggggacgggttaac
aaagatacaggaagcaatcctcatggttaccttccaactcattatgagaaggtgcagatg
ctcttaagtgatagattccttggattttatatggttcctgacaatggtccatggaattac
aatttcatgggagtgaagcatacagttagcatgaaatacggggtgaagcttgggacacct
agagaatactacaatgaggaccacaggccaactcatttcctcgagttcagcaacttggag
gaaggtgatactgctgaaggagatcgagaggatacgtttacctga
DBGET
integrated database retrieval system
