KEGG   Durio zibethinus (durian): 111279284
Entry
111279284         CDS       T05242                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111279284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dzi03041]
    111279284
Spliceosome [BR:dzi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    111279284
 Complex C
   U5 SnRNP specific factors
    111279284
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR19_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_RIG_1st Nbas_N RMC1_N
Other DBs
NCBI-GeneID: 111279284
NCBI-ProteinID: XP_022722025
UniProt: A0A6P5X0U5
LinkDB
Position
Unknown
AA seq 341 aa
MEIVSREGENALSGPRPMEWSTVPFTQGPERNGYKRTSSLESPIMLLTGHQSAIYTMKFN
PAGTVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLYWTTDGSQIISASPDKTLRA
WDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ
ITAVSFSDASDKIFTGGIDNDVKIWDLRKGEVSMTLQGHQDMITGMSLSPDGSYLLTNGM
DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVNIWDTT
SRRILYKLPGHTGSVNESVFHPNEPIIGSCSSDKQIYLGEI
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggaaattgtttcgagggagggtgaaaatgcattgtcaggtccaaggccaatggaatgg
tctactgttccattcactcaaggaccagagagaaatggatataaacgtacatcaagtctg
gaatcaccaataatgttgctgactggacatcagagtgctatatatacaatgaagtttaat
ccagctggaactgttgtcgcatctggatcacacgacaaagaaatttttctgtggaatgtc
catggggactgcaaaaacttcatggttctaaaagggcacaagaatgcagtcttggatctt
tattggactactgatggatcccagataatatcagctagccctgacaaaactttgagagca
tgggatgttgaaacagggaaacaaattaaaaagatggcagaacactcttcttttgtgaat
tcgtgctgtccatcacggagagggccacctcttgttgttagtggatctgatgatggaact
gctaaactctgggatatgcgtcagagaggtgctatccaaacatttcctgataagtaccaa
attacagccgttagtttctctgatgcatcagataagatctttacaggtggcattgacaat
gatgttaagatttgggatttgcgtaaaggtgaagtaagcatgacacttcaaggtcatcaa
gacatgataacaggtatgagtttgagtcctgatggttcctaccttctcaccaatggtatg
gattgcaagctctgcatatgggatatgcgcccttatgcaccacagaatcgttgtgtaaag
attttggaaggtcaccagcacaattttgaaaagaacttgttgaaatgtggttggtcacct
gatggaagcaaggtcacagctggtagttcagataggatggtgaacatatgggacacaact
tctcgacgcatcttgtataagcttcctggccacacaggatctgtgaatgaatccgtcttc
catcctaatgaacctatcattggttcatgtagtagcgataagcagatttatctgggggag
atctga

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