Durio zibethinus (durian): 111280340
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Entry
111280340 CDS
T05242
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03020
RNA polymerase
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111280340
09124 Replication and repair
03420 Nucleotide excision repair
111280340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111280340
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111280340
Enzymes [BR:
dzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111280340
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111280340
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111280340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111280340
NCBI-ProteinID:
XP_022723357
UniProt:
A0A6P5X6R9
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MEDDSEYDPQLIDDEEDEEITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDF
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLV
AKGFIEYIDTEEEETTMISMTINDLVQARTNPEEAYSETYTHCEIHPSLILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYSRRDHSIS
LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
WTVEGITPDVIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALH
KCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE
CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKELPKDHKKKGA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacagcgagtacgatccacaactaattgacgacgaagaagacgaggaaatc
acccaggaagacgcgtgggcggttatctctgcttatttcgacgaaaaaggattggttcgt
caacagctcgactcctttgacgagtttatccaaaacacgatgcaagaaattgtcgatgaa
tcggccgatatcgagatcaggcccgagtcacagcacaatcctggtcaccagtctgacttt
gcagagactatctataagattagctttggtcagatctacctaagtaaacctatgatgaca
gagtccgatggtgaaactgcaactttatttccaaaagctgcaaggttgaggaatctcaca
tactcagctcccttgtatgttgatgtaactaaaagagttataaagaaaggtcatgatggt
gaagaagtcactgagactcaggattttaccaaagtgttcattgggaaggttcccataatg
cttcgatcaagttattgcacactatatcaaaattcagagaaggatctgactgagcttggg
gagtgtccatatgatcagggtgggtatttcattattaatgggagtgaaaaggttctaatt
gcccaggagaagatgagcacaaatcatgtctatgtcttcaaaaagaggcagccaaataaa
tatgcgtatgtggcagaagttcggtccatggcagagtcccagaataggccaccaagtacc
atgtttgtgcggatgctttcacggactagtgccaaagggggctcttcagggcagtacatt
cgtgctactcttccatatattcggactgaaattcctatcataatcgtctttcgggctttg
ggatttgttgctgacaaggacatattggagcatatatgctacgacttctctgatacccag
atgatggagttgctgcggccttccttagaagaagcatttgtgattcaaaaccagcaggtt
gctctagattatatcggtaaaagaggagcaactgttggtgttaccagagaaaagaggatt
aagtatgctaaagagatccttcaaaaggaaatgcttcctcatgttggtgttggagatttt
tgtgagacaaagaaagcttattattttgggtatatcattcatcggctgcttctttgtgca
cttggccggagggcagaagatgatagagatcattatggcaacaagaggctggaccttgct
ggtcctttacttggaggcctctttagaatgctttttcgaaagttaactagggatgtgaga
tcttatgtgcagaagtgtgtggataacggaaaggatgtaaacctgcaatttgctatcaaa
gcaaaaaccattacaagtggccttaaatactcacttgctactggaaattgggggcaagca
aatgcagctggtacaagagctggagtgtcgcaggtgttaaaccgtttgacatatgcctcc
accttgtcacacttgcgaaggctcaattctcctataggacgtgaagggaaattggctaaa
ccacgtcaattgcataattcgcagtggggaatgatgtgtccagctgagacaccagaagga
caggcctgtggacttgtaaagaatcttgccttgatggtatacataactgttggatcagct
gcatatcctattcttgaatttttggaagaatggggtacggagaattttgaggaaatctca
cctgcggttattcctcaagctacaaaaatttttgtcaatggttgctgggttggtgtgcat
cggaatcctgatatgcttgtgacaacattgagacggttgagaagacgggttgatgtcaac
actgaagttggtgttgtaagagatattcgtttaaaagaacttagaatatataccgactat
ggtcgttgcagtcggccattgttcattgtggagaagcaaaggcttctaataaaaaagaaa
gacattcatgcactgcaacaaagggaaagcccagaagatggtggctggcatgatcttgta
gcaaagggatttatcgaatatattgacacagaagaagaggagacaacaatgatttccatg
accatcaatgatcttgtccaagcaagaaccaatcctgaggaagcttattccgaaacttat
acccattgtgagatccacccttcattgattttaggtgtttgtgcttcaattataccattc
cctgatcataatcagtccccacgtaatacctatcaatctgctatgggtaagcaagcaatg
ggtatttatgtcactaactaccaatttcgaatggatacattggcctatgttctctactat
ccccaaaagccacttgttactacacgagctatggaacatctccactttcggcagcttcct
gctggcattaatgctattgtggccattgcctgctattccggatataaccaagaagattct
gttattatgaatcaatcttcaatagaccgtgggttcttccgatcacttttcttccgttcc
taccgggatgaggagaaaaaaatgggcacccttgtcaaagaagattttggtcgaccagat
agggctaatactatgggaatgaggcatggctcttatgataaattggatgatgatggtctt
gcacctcctggaacaagagtttcaggtgaggatgtaatcattggaaagaccacccctatt
tctcaggaggaagctcagggtcaagcattgcgctattcaagacgtgatcatagcataagc
ttacgtcacagtgaaacaggcatagtggaccaagttctattgacaactaatgctgatggg
ttgagatttgtgaaagtaagagtaagatctgttcggattccccagattggagacaagttt
agcagtaggcatggtcaaaagggaacagttggcatgacttacacacaggaagacatgcct
tggactgtggaaggcatcacacctgatgtcattgtgaacccccatgctattccttctcga
atgacaattggtcagcttattgagtgtatcatggggaaagttgcagctcacatgggcaag
gaaggggatgctactccttttacagatgtcactgtggacaatataagcagagcacttcat
aaatgtggttatcaaatgcgtggtttcgagaccatgtataatgggcacacgggcaggcgg
cttacttctatgatattcctggggcccacatattaccaaagactaaagcacatggttgat
gataagatccattcacgtggtcggggtcctgtgcagattctcacgaggcagcctgcagag
ggacgatcccgtgatggtggtcttcgtttcggagagatggaaagagattgcatgatagcg
catggtgctgctcattttcttaaggagagattgtttgaccaaagtgatgcatacagggtc
cacgtttgtgagcgatgtgggttgattgctattgcaaatctaaagaagaactcatttgag
tgcagaggatgcaagaataaaactgatattgttcaggtgcacattccttacgcctgtaag
ttgctcttccaagagcttatggccatggcgattgctccaagaatgcttacaaaggaactg
cccaaagaccataagaagaagggagcctaa
DBGET
integrated database retrieval system
