Durio zibethinus (durian): 111281765
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Entry
111281765 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111281765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111281765
03012 Translation factors [BR:
dzi03012
]
111281765
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111281765
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111281765
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111281765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
ATPase
AAA_30
AAA_16
PhoH
AAA_11
Motif
Other DBs
NCBI-GeneID:
111281765
NCBI-ProteinID:
XP_022725148
UniProt:
A0A6P5XA64
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MSCNSAIFQGYLRTTAMSLRPTSLQLNNTPKTLLKLSFFSFLYTTQSPGSFRRLHLRRGL
VTCSRSGAAAASSSRTLALDRRNILLPCLQQQQSFNYGSDAYRDVSSDDSDHEFGSPQSQ
MGASTIDNIDEWRWKFTMLLRNKDEQEIVSRERKDRRDFEQLSALATRMGLHSSRQYAKV
VVFSKLQLPNYRSDLDDKRPQREVILPFGLQRDVDLHLKAYLSHKAMSNGSFSDKSLPRS
SGGGRIAADEVPIEHQESFTQNSVVMERILRRRSLQLRNKQQEWQESPEGKKMLEFRRSL
PAYKERDALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAAHGASCNIICTQPRRI
SAMAVSERVAAERGEKLGESVGYKVRLEGMKGRNTRLLFCTTGILLRRLLVDRDLRGVSH
VIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYYGGAPTIHIPGFT
YPVRSHFLENILEMTGYRLTPYNQIDDYGQEKMWKMQKQAQYLKKKKSQLTSAVEDVLEI
ADFRGCSLRTRQSLSCWNPDSIGFNVIEHILCLIVKKERPGAVLVFMTGWDDINSLKDQL
QAHPLLGDPSKVLLLACHGSMPSSEQRLIFEKPEDGVRKIVLATNMAETSITINDVVFVV
DCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPKCVYDTFADYQ
LPELLRTPLQSLCLQIKSLELGGITEFLSRALQPPELLSVQNAVEYLKIIGALDENENLT
VLGHNLSMLPVEPKLGKMLILGAIFSCLDPITTVVAGLSVRDPFLMPFDKKDLAESAKAQ
FSGQEYSDHIALIRAYEGWKEAEREQSGYEYCWKNFLSAQTLKAIDSLRKQFFYLLKATG
LVDQNIENCNKWSHDEHLIQAVICAGLFPGICSVVNKEKSIALKTMEDGQVLLHLNSVNA
GVPKIPYPWLVFNEKVKVNAVFLRDSTGVSDSVLLLFGGNISRSGLDGHLKMLGGYLEFF
MKPDLADTYLSLKRELEELIQKKLLNPRLDMQSSNELLSAVRLLVSEDQCEGRFVFGRQV
PVSSKKTAIVKTPGTGGADNSKSQLQTVLARAGHGAPIYKTKQLKNNQFRSTVIFNGLDF
MGQPRSSKKLAEKDAAAQALLWLRGEDYSSSRDIDHASLLLKKSKNRRT
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtaactcagctatatttcagggctatctgaggacaactgccatgtctctgaga
cccacttccctccaactcaacaacacccctaaaacacttttaaaactttctttcttctcc
tttctctatacgacccaatcccctggttctttccggcgtttgcatttgaggcgtggcctc
gtaacgtgctctaggtctggtgctgctgctgcttcttcttccaggactcttgccttggat
cggaggaacattttgttgccttgtttgcagcagcagcaaagctttaattatggctccgat
gcttaccgggatgtttccagtgatgactcagaccacgaattcgggtctccacagtctcaa
atgggtgcttcaaccattgacaatattgatgaatggagatggaaatttactatgcttctt
cgaaacaaggatgagcaagagatagtatctagggagagaaaggacaggcgtgactttgag
caactttcagctctagcaaccagaatgggcttacatagcagccgccaatatgcaaaagta
gtcgtttttagtaaacttcagctgccaaattatagatctgatcttgatgataagcgccca
caaagagaggtaatcttaccttttggcctgcaaagagatgtagaccttcacctcaaagct
tacctttctcataaggctatgagcaatggtagcttttcagataagtctttgccgagatca
agtggtggtggaagaattgctgcagatgaagtacctattgagcatcaagagtcctttaca
cagaatagtgttgtcatggagaggattcttcggcggagaagtttgcaactccgtaataag
caacaagaatggcaggaatctcctgaaggcaaaaagatgcttgaatttcgtagaagcctg
cctgcatataaagaaagggatgcattgctaaatgctatctcacagaatcaggtggttgtt
gtctctggtgaaactggttgtggtaaaaccacacaacttcctcagtacatattagaatct
gagattgaagctgctcatggagcttcctgtaatattatttgtactcagcctaggagaata
tctgctatggctgtttccgaaagagttgctgcagaaagaggggagaaattgggagaatct
gttggttataaagtacgccttgagggaatgaaaggaagaaacacccgccttcttttttgt
acaactggcattttacttaggcggctacttgttgacagggatttgagaggtgtaagtcat
gttattgttgatgagattcatgaacgtggaatgaatgaagattttcttcttatcgtgttg
aaagatctccttcctcgtaggccagagttgagattgattttgatgagtgcaactttaaat
gctgagctcttttcctcttactatggtggtgccccaacaatccatattcctggttttact
tatcctgtccgatcacattttctggagaatattctagagatgactgggtacaggttaact
ccatataatcaaattgatgattatggtcaagaaaagatgtggaaaatgcagaaacaggcc
caatatcttaaaaagaagaagagtcagctaacttctgcagttgaggatgtacttgaaatt
gctgacttcagggggtgtagtttacggactcgacagtctttatcctgttggaatcctgac
tcaattggtttcaatgtcattgagcatattctttgcctcatagtaaagaaagagaggcct
ggtgctgttttggttttcatgactggttgggatgacataaactctctaaaagatcagctc
caggctcatcctctccttggggatcctagcaaggtgttgttgcttgcatgccatggttcc
atgcctagctctgagcagaggttaatatttgagaagcctgaagatggagtgaggaaaata
gttctagctactaatatggctgagactagcatcaccatcaatgacgtggtttttgtggtt
gattgtggaaaggcaaaagaaacttcctatgatgcactaaataatacaccttgtttgctt
ccatcttggatatcaaaggctgctgcccgccaaagaaggggaagagctggtcgtgttcaa
cctggcgagtgttaccatctttatcccaaatgtgtttatgatacttttgctgattaccaa
cttccagagcttttaaggacaccgttacagtctttatgtttgcaaatcaaaagtctagag
cttggaggtatcactgagttcctttctagggcattgcagcccccagaacttctgtcggtg
caaaatgctgttgaatatctgaagattattggagctttagatgagaatgagaacttaaca
gtgctaggacacaacttgtcaatgcttccggttgagcctaaacttgggaaaatgctgata
ctgggggctattttcagctgtttagatccaataacgactgttgttgctgggctcagtgtc
agagatccattcctgatgccatttgacaagaaagatcttgctgaatcggcaaaagcccaa
ttctcaggccaggagtacagtgatcatattgcacttatccgagcctacgagggttggaaa
gaagctgaaagagagcagtctggttatgagtattgttggaagaattttctttctgcacaa
actctcaaggccattgactctctacgaaagcagtttttctatttgctcaaggctactggt
ctagttgatcaaaatatagaaaactgcaacaaatggagccatgatgagcatctcatccaa
gcagtcatttgtgctggcttatttccagggatatgctctgttgtgaacaaagagaagtca
attgcactgaaaacaatggaggatggtcaagttcttctacacttgaattcagtgaatgct
ggagttcccaaaattccatacccatggctggttttcaatgaaaaggtaaaagtgaatgca
gtattcctccgcgattcaacgggtgtttctgattctgtgctgctcttatttggagggaac
atttcaagaagtggactagatggacatctaaaaatgttgggaggatatttggagttcttc
atgaaacctgatttagctgatacatatttaagcttgaaaagagagctcgaggaactaatt
cagaagaaacttttgaaccctagattagatatgcaatcaagcaatgagctcctctcagca
gtaagattgctggtctcagaagaccaatgtgagggcagatttgtctttggccgtcaggtg
ccagtatcatcaaagaagacagctatagtgaaaacaccaggtacaggcggggctgataat
tcaaagagtcagctgcaaacagtgcttgccagggctggacatggagcacccatctacaag
acaaaacagctaaagaacaaccagttccgatccactgtgatctttaatgggctggatttt
atggggcagcctcgcagcagcaaaaaacttgcagagaaggatgcagctgctcaggctctt
ctgtggttgaggggtgaagactattcatcttccagagatattgaccatgcatcattgctt
ttgaaaaagagcaaaaacaggagaacttag
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integrated database retrieval system
